RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	MSL3P1	P0C860	447 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	EBLN1	P0CF75	366 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	MYCLP1	P12525	358 aa	Predicted RBP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	CCDC130	P13994	396 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	CPA1	P15085	419 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	PTMS	P20962	102 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	ZFP36	P26651	326 aa	Known RBP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	ERCC5	P28715	1186 aa	Predicted RBP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	ADCY8	P40145	1251 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	ACTR1B	P42025	376 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	MAPK9	P45984	424 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	SUOX	P51687	545 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	ACTR1A	P61163	376 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	YWHAG	P61981	247 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	PCSK7	Q16549	785 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	CALCRL	Q16602	461 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	ZNF766	Q5HY98	468 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	GPRC6A	Q5T6X5	926 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	SLFN12L	Q6IEE8	588 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	FAM166A	Q6J272	317 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	CAVIN1	Q6NZI2	390 aa	Known RBP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	MRPL14	Q6P1L8	145 aa	Known RBP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	MSANTD2	Q6P1R3	559 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	DEF8	Q6ZN54	512 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	RUFY3	Q7L099	469 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	BHLHA9	Q7RTU4	235 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	SLC9B2	Q86UD5	537 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	C1QL4	Q86Z23	238 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	PLPP6	Q8IY26	295 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	RELL2	Q8NC24	303 aa	Predicted RBP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	PLA2G15	Q8NCC3	412 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	GATAD1	Q8WUU5	269 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	TMEM171	Q8WVE6	324 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	KCNB2	Q92953	911 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	ZDHHC12	Q96GR4	267 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	CCDC138	Q96M89	665 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	SERINC2	Q96SA4	455 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	TTYH2	Q9BSA4	534 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	CEP44	Q9C0F1	390 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	NUCKS1	Q9H1E3	243 aa	Known RBP	4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	RBSN	Q9H1K0	784 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	DIAPH3	Q9NSV4	1193 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.79	□□□□□ -1.64	2e-7	■■□□□ 12.2
MSI2-216	ENST00000582772	GNPTG	Q9UJJ9	305 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	IKZF3	Q9UKT9	509 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	KCNS2	Q9ULS6	477 aa		4.79	□□□□□ -1.64
MSI2-216	ENST00000582772	IGHV5-51	A0A0C4DH38	117 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	KIR2DS5	A0A0G2JLQ3	304 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772		A0A0G2JNG1	304 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	C2orf72	A6NCS6	295 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	FAM47E-STBD1	D6RA91	191 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772		E7ENQ6	273 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	TRIM77	I1YAP6	450 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	KIR2DS3	K7RE56	304 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	TTI1	O43156	1089 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	EPB41L2	O43491	1005 aa	Known RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	SMAD6	O43541	496 aa	Known RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	BUB1B	O60566	1050 aa	Predicted RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	CNOT3	O75175	753 aa	Known RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	PPP1R3D	O95685	299 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	EML2	O95834	649 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	PCCB	P05166	539 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	IGHV4-31	P0DP07	118 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	GLI4	P10075	376 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	HOXB1	P14653	301 aa	Predicted RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	AGXT	P21549	392 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	ABCD1	P33897	745 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	CYLC1	P35663	651 aa	Predicted RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	KCNC1	P48547	511 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	ARSE	P51690	589 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	CCNH	P51946	323 aa	Predicted RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	UBE2I	P63279	158 aa	Known RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	OCRL	Q01968	901 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	KCNA1	Q09470	495 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	ABR	Q12979	859 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	LRP8	Q14114	963 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	KIR2DS5	Q14953	304 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	PTCHD3	Q3KNS1	767 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	ADCK5	Q3MIX3	580 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	TUBB8	Q3ZCM7	444 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	RAB41	Q5JT25	222 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	CASC10	Q5T4H9	136 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	PM20D1	Q6GTS8	502 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	KIRREL2	Q6UWL6	708 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	USP43	Q70EL4	1123 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	CCAR2	Q8N163	923 aa	Known RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	CRYBG2	Q8N1P7	616 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	MRAP	Q8TCY5	172 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	CPLX3	Q8WVH0	158 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	CLIP3	Q96DZ5	547 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	SCMH1	Q96GD3	660 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	INTS4	Q96HW7	963 aa	Known RBP	4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	SCYL1	Q96KG9	808 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	HERPUD2	Q9BSE4	406 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	ANGPTL4	Q9BY76	406 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	WDR26	Q9H7D7	661 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	UBTD1	Q9HAC8	227 aa		4.78	□□□□□ -1.64
MSI2-216	ENST00000582772	SPTLC3	Q9NUV7	552 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms