RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ITIH4Q14624 930 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 STAT4Q14765 748 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CHRNA6Q15825 494 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ATP13A5Q4VNC0 1218 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FASTKD1Q53R41 847 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HSP90AA5PQ58FG0 334 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 AARS2Q5JTZ9 985 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PACS1Q6VY07 963 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MARK2Q7KZI7 788 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ABI3BPQ7Z7G0 1075 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SDCCAG8Q86SQ7 713 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 IQCHQ86VS3 1027 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TDRPQ86YL5 185 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PIANPQ8IYJ0 282 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 DDHD1Q8NEL9 900 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 OR6P1Q8NGX9 317 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CFAP36Q96G28 342 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 BMFQ96LC9 184 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FAM167BQ9BTA0 163 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ROPN1BQ9BZX4 212 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ASB8Q9H765 288 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ROPN1Q9HAT0 212 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MBNL1Q9NR56 388 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SMYD2Q9NRG4 433 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CATSPERZQ9NTU4 200 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 C20orf96Q9NUD7 363 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 INTS10Q9NVR2 710 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ZNF180Q9UJW8 692 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 COQ6Q9Y2Z9 468 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NFS1Q9Y697 457 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SLC30A1Q9Y6M5 507 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PI4KAP42356 2102 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 THADAQ6YHU6 1953 aa11.03□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FADS2P1A8MWK0 482 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CXorf49A8MYA2 514 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RAD51BO15315 384 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A9O60656 530 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ACSL3O95573 720 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 AHSGP02765 367 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FTH1P19P0C7X4 201 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ERVK-10P10266 1014 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ENGP17813 658 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A6P19224 532 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ITGALP20701 1170 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A1P22309 533 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A4P22310 534 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ACRV1P26436 265 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A3P35503 534 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A5P35504 534 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PTGER3P43115 390 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TTPAP49638 278 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 EIF3BP55884 814 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TMPRSS15P98073 1019 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 OVGP1Q12889 678 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 THOC5Q13769 683 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KLHL38Q2WGJ6 581 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KBTBD12Q3ZCT8 623 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TRIM61Q5EBN2 209 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LDLRAP1Q5SW96 308 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UBAP2Q5T6F2 1119 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RNF187Q5TA31 235 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PEAR1Q5VY43 1037 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FBXO38Q6PIJ6 1188 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC23A3Q6PIS1 610 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FAM151BQ6UXP7 276 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PTAR1Q7Z6K3 402 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LRRC6Q86X45 466 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DCP2Q8IU60 420 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC41A1Q8IVJ1 513 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UNC5BQ8IZJ1 945 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PELI3Q8N2H9 469 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 NXPE1Q8N323 547 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PLA2G15Q8NCC3 412 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC44A1Q8WWI5 657 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CDKL2Q92772 493 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GLYATL1Q969I3 302 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SCARF2Q96GP6 870 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 AGAP2Q99490 1192 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TTC1Q99614 292 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CCDC77Q9BR77 488 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SPATA16Q9BXB7 569 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 NUSAP1Q9BXS6 441 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 VIPAS39Q9H9C1 493 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 VPS37BQ9H9H4 285 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A7Q9HAW7 530 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A10Q9HAW8 530 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 UGT1A8Q9HAW9 530 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TRIM39Q9HCM9 518 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ZDHHC3Q9NYG2 299 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC24A2Q9UI40 661 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FBXO5Q9UKT4 447 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CORO1CQ9ULV4 474 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 VPS9D1Q9Y2B5 631 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DOCK9Q9BZ29 2069 aa11.02□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TEX51A0A1B0GUA7 166 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 A0A1W2PR77 199 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 OR51F1A6NGY5 319 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FAM47DPA6NHR8 397 aa11.01□□□□□ -0.65
CDK5RAP3-204ENST00000577664 K7ESM1 405 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms