RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 PRAMEF1O95521 474 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 ITGALP20701 1170 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 AKT1P31749 480 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 UGT1A5P35504 534 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 HALP42357 657 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 LMAN1P49257 510 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 ZFP36L1Q07352 338 aaKnown RBP13.64□□□□□ -0.23
NDE1-211ENST00000576502 CCDC173Q0VFZ6 552 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 SQSTM1Q13501 440 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 CHRNA6Q15825 494 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 COL28A1Q2UY09 1125 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 B3GNT8Q7Z7M8 397 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 CLEC14AQ86T13 490 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 SLC13A5Q86YT5 568 aaPredicted RBP13.64□□□□□ -0.23
NDE1-211ENST00000576502 JAMLQ86YT9 394 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 SLITRK4Q8IW52 837 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 SFTPA2Q8IWL1 248 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 RBM12BQ8IXT5 1001 aaKnown RBP13.64□□□□□ -0.23
NDE1-211ENST00000576502 DDHD1Q8NEL9 900 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 OR4K2Q8NGD2 314 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 OR4D9Q8NGE8 314 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 ZNF398Q8TD17 642 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 TMEM121Q9BTD3 319 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 ARNT2Q9HBZ2 717 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 LZTFL1Q9NQ48 299 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 CPNE7Q9UBL6 633 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 TBC1D29Q9UFV1 150 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 PCDHGA7Q9Y5G6 932 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 ARL5AQ9Y689 179 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 DMXL2Q8TDJ6 3036 aa13.64□□□□□ -0.23
NDE1-211ENST00000576502 ASPMQ8IZT6 3477 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 IGHV1OR21-1A0A087WYE8 117 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 A0A0U1RQJ8 604 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 CDRT15L2A8MXV6 281 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 E7EVH7 732 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 MTX2O75431 263 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 VIPP01282 170 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 CSTF2P33240 577 aaKnown RBP eCLIP13.63□□□□□ -0.23
NDE1-211ENST00000576502 FDFT1P37268 417 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 PLA2G4EQ3MJ16 856 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.63□□□□□ -0.23
NDE1-211ENST00000576502 ZNF648Q5T619 568 aaPredicted RBP13.63□□□□□ -0.23
NDE1-211ENST00000576502 MEI1Q5TIA1 1274 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 WASH2PQ6VEQ5 465 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 USP53Q70EK8 1073 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 AMZ2Q86W34 360 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 CCDC89Q8N998 374 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 ANP32BQ92688 251 aaKnown RBP13.63□□□□□ -0.23
NDE1-211ENST00000576502 DCUN1D1Q96GG9 259 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 APOL2Q9BQE5 337 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 B3GNT4Q9C0J1 378 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 ASB8Q9H765 288 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 UCK1Q9HA47 277 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 RDH14Q9HBH5 336 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 WASH6PQ9NQA3 447 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 PISDQ9UG56 409 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 CRLS1Q9UJA2 301 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 ZNF148Q9UQR1 794 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 DNAJC16Q9Y2G8 782 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 ZKSCAN5Q9Y2L8 839 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 FREM2Q5SZK8 3169 aa13.63□□□□□ -0.23
NDE1-211ENST00000576502 ZNF106Q9H2Y7 1883 aaKnown RBP13.63□□□□□ -0.23
NDE1-211ENST00000576502 TRBV23OR9-2A0A075B6M9 112 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 A6NCN8 305 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 LILRA5A6NI73 299 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 BUD23O43709 281 aaKnown RBP13.62□□□□□ -0.23
NDE1-211ENST00000576502 SRP72O76094 671 aaKnown RBP13.62□□□□□ -0.23
NDE1-211ENST00000576502 AP2A1O95782 977 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 IFNB1P01574 187 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 XRCC1P18887 633 aaPredicted RBP13.62□□□□□ -0.23
NDE1-211ENST00000576502 CD82P27701 267 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 CD1CP29017 333 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 LIMK2P53671 638 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 TMPRSS3P57727 454 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 NFATC2Q13469 925 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 GPRC6AQ5T6X5 926 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 AGAP9Q5VTM2 703 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 TMEM71Q6P5X7 295 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 WDR74Q6RFH5 385 aaPredicted RBP13.62□□□□□ -0.23
NDE1-211ENST00000576502 C4orf22Q6V702 233 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 PDZD3Q86UT5 571 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 SPACA3Q8IXA5 215 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 KLHDC8BQ8IXV7 354 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 BEND7Q8N7W2 519 aaPredicted RBP13.62□□□□□ -0.23
NDE1-211ENST00000576502 AGBL5Q8NDL9 886 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 CXorf40BQ96DE9 158 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 RTP4Q96DX8 246 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 GORASP1Q9BQQ3 440 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 VPS37BQ9H9H4 285 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 PRDM8Q9NQV8 689 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 HOMER3Q9NSC5 361 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 POT1Q9NUX5 634 aa13.62□□□□□ -0.23
NDE1-211ENST00000576502 R3HDM2Q9Y2K5 976 aaKnown RBP13.62□□□□□ -0.23
NDE1-211ENST00000576502 PTPRQQ9UMZ3 2332 aa13.61□□□□□ -0.23
NDE1-211ENST00000576502 NVLO15381 856 aaKnown RBP13.61□□□□□ -0.23
NDE1-211ENST00000576502 LIASO43766 372 aa13.61□□□□□ -0.23
NDE1-211ENST00000576502 UGT1A9O60656 530 aa13.61□□□□□ -0.23
NDE1-211ENST00000576502 UGT1A6P19224 532 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms