RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 THRAP10827 490 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 BRAFP15056 766 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 ZNF7P17097 686 aaPredicted RBP11.72□□□□□ -0.53
LITAF-219ENST00000576334 HMGCLP35914 325 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 SLC19A1P41440 591 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 CTSCP53634 463 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 RWDD2BP57060 319 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 TMEM115Q12893 351 aaPredicted RBP11.72□□□□□ -0.53
LITAF-219ENST00000576334 LY6DQ14210 128 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 INSCQ1MX18 579 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 ANKRD20A2Q5SQ80 823 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 ANKRD20A1Q5TYW2 823 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 ANKRD20A3Q5VUR7 823 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 C11orf96Q7Z7L8 435 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 KIAA1328Q86T90 577 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 PHYKPLQ8IUZ5 450 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 TAB3Q8N5C8 712 aaPredicted RBP11.72□□□□□ -0.53
LITAF-219ENST00000576334 OR4D9Q8NGE8 314 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 GDAP1Q8TB36 358 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 ART4Q93070 314 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 CTRCQ99895 268 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
LITAF-219ENST00000576334 ZMYND15Q9H091 742 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 GBA3Q9H227 469 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 RMI1Q9H9A7 625 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 SARS2Q9NP81 518 aaKnown RBP11.72□□□□□ -0.53
LITAF-219ENST00000576334 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.72□□□□□ -0.53
LITAF-219ENST00000576334 ZNF624Q9P2J8 865 aaPredicted RBP11.72□□□□□ -0.53
LITAF-219ENST00000576334 CPNE7Q9UBL6 633 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 WDR37Q9Y2I8 494 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 R3HDM2Q9Y2K5 976 aaKnown RBP11.72□□□□□ -0.53
LITAF-219ENST00000576334 SLC30A1Q9Y6M5 507 aa11.72□□□□□ -0.53
LITAF-219ENST00000576334 TEX51A0A1B0GUA7 166 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 PRR19A6NJB7 356 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 PDZK1P1A8MUH7 402 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 BTNL10A8MVZ5 291 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 K7ENP7 123 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 DDX3YO15523 660 aaKnown RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 MTSS1O43312 755 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 TYRP1P17643 537 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 ADRA1AP35348 466 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 MLLT3P42568 568 aaPredicted RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 GFERP55789 205 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 COPS2P61201 443 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 UBE2IP63279 158 aaKnown RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 CYP4F2P78329 520 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 MPP3Q13368 585 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 XRCC4Q13426 336 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 CLCA4Q14CN2 919 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 TMEM71Q6P5X7 295 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 DARS2Q6PI48 645 aaKnown RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 INO80CQ6PI98 192 aaPredicted RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 CCDC81Q6ZN84 652 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 FAM83HQ6ZRV2 1179 aaPredicted RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 LRRTM4Q86VH4 590 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 FAM129CQ86XR2 697 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 TRAPPC5Q8IUR0 188 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 BEND7Q8N7W2 519 aaPredicted RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 RASGEF1AQ8N9B8 481 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 AHCYL2Q96HN2 611 aaKnown RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 VPS35Q96QK1 796 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 CCNL2Q96S94 520 aaPredicted RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 VAT1Q99536 393 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 FSD1LQ9BXM9 530 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 LUC7LQ9NQ29 371 aaKnown RBP11.71□□□□□ -0.53
LITAF-219ENST00000576334 OGFRQ9NZT2 677 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 TRHDEQ9UKU6 1024 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 B3GALT1Q9Y5Z6 326 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 CAPN6Q9Y6Q1 641 aa11.71□□□□□ -0.53
LITAF-219ENST00000576334 ZNF106Q9H2Y7 1883 aaKnown RBP11.7□□□□□ -0.54
LITAF-219ENST00000576334 GLYATL1P3A0A0U1RQE8 302 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 CCDC66A2RUB6 948 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 OR2AG2A6NM03 316 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 EIF4E1BA6NMX2 242 aaKnown RBP11.7□□□□□ -0.54
LITAF-219ENST00000576334 EFCAB7A8K855 629 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 KMOO15229 486 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 IPO7O95373 1038 aaKnown RBP11.7□□□□□ -0.54
LITAF-219ENST00000576334 EPOP01588 193 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 LIPCP11150 499 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 HLA-DPA1P20036 260 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 PBLDP30039 288 aaPredicted RBP11.7□□□□□ -0.54
LITAF-219ENST00000576334 SPAM1P38567 509 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 GEMP55040 296 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 GDF10P55107 478 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 GPLD1P80108 840 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 TMPRSS15P98073 1019 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 MSLNQ13421 630 aaPredicted RBP11.7□□□□□ -0.54
LITAF-219ENST00000576334 SQSTM1Q13501 440 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 KCTD19Q17RG1 926 aaPredicted RBP11.7□□□□□ -0.54
LITAF-219ENST00000576334 GPRC6AQ5T6X5 926 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 ANKS6Q68DC2 871 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 PDPK2PQ6A1A2 396 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 DENND5AQ6IQ26 1287 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 RANBP10Q6VN20 620 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 DET1Q7L5Y6 550 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 PEX26Q7Z412 305 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 SLC9B2Q86UD5 537 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 OR4K2Q8NGD2 314 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 OR13C4Q8NGS5 318 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 OR10G6Q8NH81 332 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms