RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 KLHL8Q9P2G9 620 aaPredicted RBP20.83■□□□□ 0.93
CHRNB1-206ENST00000574054 CHUKO15111 745 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 VEGFDO43915 354 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 CDK14O94921 469 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 TYRP1P17643 537 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 CD68P34810 354 aaPredicted RBP20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 MAGEA1P43355 309 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 WASHC5Q12768 1159 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 TAZQ16635 292 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 KHDC1Q4VXA5 237 aaKnown RBP20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 TFDP3Q5H9I0 405 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 CEACAM20Q6UY09 585 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 PLXDC1Q8IUK5 500 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 TRAPPC5Q8IUR0 188 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 CCDC50Q8IVM0 306 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 SLC25A41Q8N5S1 370 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 P3H4Q92791 437 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 RTP4Q96DX8 246 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 TRIM10Q9UDY6 481 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 ALG6Q9Y672 507 aa20.82■□□□□ 0.92
CHRNB1-206ENST00000574054 MTSS1O43312 755 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 SLC19A1P41440 591 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 GFERP55789 205 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 TBX2Q13207 712 aaPredicted RBP20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 GTF2H3Q13889 308 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 ATP13A5Q4VNC0 1218 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 KDELC1Q6UW63 502 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 TMEM26Q6ZUK4 368 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 TIMM29Q9BSF4 260 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 SLC12A9Q9BXP2 914 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 APMAPQ9HDC9 416 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 TMPRSS11EQ9UL52 423 aa20.81■□□□□ 0.92
CHRNB1-206ENST00000574054 UBXN7O94888 489 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 ZRANB2O95218 330 aaKnown RBP eCLIP20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 AMD1P17707 334 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 XRCC1P18887 633 aaPredicted RBP20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 RPL10P27635 214 aaKnown RBP20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 CHRNA4P43681 627 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 MARCKSL1P49006 195 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 DRG2P55039 364 aaKnown RBP20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 ADCY2Q08462 1091 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 SIRPB2Q5JXA9 342 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 PID1Q7Z2X4 250 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 ZNF547Q8IVP9 402 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 NLGN4XQ8N0W4 816 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 TTC30BQ8N4P2 665 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 NLGN4YQ8NFZ3 816 aaPredicted RBP20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 BLOC1S5Q8TDH9 187 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 KIAA1143Q96AT1 154 aaPredicted RBP20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 TTC25Q96NG3 672 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 TGM7Q96PF1 710 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 VPS35Q96QK1 796 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 ZPBPQ9BS86 351 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 GPN2Q9H9Y4 310 aaPredicted RBP20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 UCK1Q9HA47 277 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 FBXO8Q9NRD0 319 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 ZNF624Q9P2J8 865 aaPredicted RBP20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 PILRAQ9UKJ1 303 aa20.8■□□□□ 0.92
CHRNB1-206ENST00000574054 MN1Q10571 1320 aaPredicted RBP20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 hCG_1818297A0A087WSY0 165 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 LOC285095A0A1B0GVY8 99 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 POLR1CO15160 346 aaPredicted RBP20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 SFTPCP11686 197 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 VCLP18206 1134 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 IDSP22304 550 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 HMGCLP35914 325 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 HADHBP55084 474 aaKnown RBP20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 NFKB2Q00653 900 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 CLCA4Q14CN2 919 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 GLT6D1Q7Z4J2 308 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 KATNAL2Q8IYT4 538 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 RCOR2Q8IZ40 523 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 ZNF567Q8N184 647 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 IPMKQ8NFU5 416 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 CXorf40BQ96DE9 158 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 OXNAD1Q96HP4 312 aaPredicted RBP20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 QKIQ96PU8 341 aaKnown RBP eCLIP20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 TRABDQ9H4I3 376 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 IL26Q9NPH9 171 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 STARD5Q9NSY2 213 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 OGFRQ9NZT2 677 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 TFR2Q9UP52 801 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 SLC30A1Q9Y6M5 507 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 MYO18BQ8IUG5 2567 aa20.79■□□□□ 0.92
CHRNB1-206ENST00000574054 OR52A4PA6NMU1 304 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 ZNF891A8MT65 544 aaPredicted RBP20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 BUD23O43709 281 aaKnown RBP20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 STK17BO94768 372 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 MAP4P27816 1152 aaKnown RBP20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 SPAM1P38567 509 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 FOXM1Q08050 763 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 TMEM115Q12893 351 aaPredicted RBP20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 PPP2R5EQ16537 467 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 CCDC181Q5TID7 509 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 BORAQ6PGQ7 559 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 FAM151BQ6UXP7 276 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 UNC5BQ8IZJ1 945 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 RNF31Q96EP0 1072 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 RBM41Q96IZ5 413 aaKnown RBP20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 MRGPRX2Q96LB1 330 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms