RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 UGT1A4P22310 534 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 HMGCLP35914 325 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 MAPK9P45984 424 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 TFDP2Q14188 446 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 PDPK2PQ6A1A2 396 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 SARM1Q6SZW1 724 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 FAM129CQ86XR2 697 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 SLC25A41Q8N5S1 370 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 FCRL5Q96RD9 977 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 HEMGNQ9BXL5 484 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 UGT1A7Q9HAW7 530 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 UGT1A10Q9HAW8 530 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 UGT1A8Q9HAW9 530 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 IL17CQ9P0M4 197 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 KLHL3Q9UH77 587 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 DNAJC16Q9Y2G8 782 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 DUSP10Q9Y6W6 482 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 CDK14O94921 469 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 ZRANB2O95218 330 aaKnown RBP eCLIP17.83■□□□□ 0.44
CHD3-214ENST00000572579 EPOP01588 193 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 ITGB2P05107 769 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 EPHA4P54764 986 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 TMEM115Q12893 351 aaPredicted RBP17.83■□□□□ 0.44
CHD3-214ENST00000572579 CHRNA6Q15825 494 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 SEPT7Q16181 437 aaKnown RBP17.83■□□□□ 0.44
CHD3-214ENST00000572579 TFDP3Q5H9I0 405 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 ABRAXAS1Q6UWZ7 409 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 TMEM26Q6ZUK4 368 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 PHYKPLQ8IUZ5 450 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 RCOR2Q8IZ40 523 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 RNF31Q96EP0 1072 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 VPS35Q96QK1 796 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 OSGEPL1Q9H4B0 414 aa17.83■□□□□ 0.44
CHD3-214ENST00000572579 SIDT1Q9NXL6 827 aaKnown RBP17.83■□□□□ 0.44
CHD3-214ENST00000572579 REXO2Q9Y3B8 237 aaKnown RBP17.83■□□□□ 0.44
CHD3-214ENST00000572579 TLN1Q9Y490 2541 aaKnown RBP17.83■□□□□ 0.44
CHD3-214ENST00000572579 SETXQ7Z333 2677 aaKnown RBP17.82■□□□□ 0.44
CHD3-214ENST00000572579 LILRA5A6NI73 299 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 OR5K4A6NMS3 321 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 OR52A4PA6NMU1 304 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 GPR89AB7ZAQ6 455 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 KMOO15229 486 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 C9P02748 559 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 GPR89BP0CG08 455 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 TYRP1P17643 537 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 RPL10P27635 214 aaKnown RBP17.82■□□□□ 0.44
CHD3-214ENST00000572579 LEPRP48357 1165 aaKnown RBP17.82■□□□□ 0.44
CHD3-214ENST00000572579 CTSCP53634 463 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 DRG2P55039 364 aaKnown RBP17.82■□□□□ 0.44
CHD3-214ENST00000572579 NFKB2Q00653 900 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 MSLNQ13421 630 aaPredicted RBP17.82■□□□□ 0.44
CHD3-214ENST00000572579 OLIG2Q13516 323 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 SLC1A5Q15758 541 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 DCAF12Q5T6F0 453 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 XKR5Q6UX68 686 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 FAM83HQ6ZRV2 1179 aaPredicted RBP17.82■□□□□ 0.44
CHD3-214ENST00000572579 MICALCLQ6ZW33 695 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 PID1Q7Z2X4 250 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 LRRTM4Q86VH4 590 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 RASGEF1AQ8N9B8 481 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 NAT14Q8WUY8 206 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 P3H4Q92791 437 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 SH3KBP1Q96B97 665 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 QKIQ96PU8 341 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHD3-214ENST00000572579 TIMM29Q9BSF4 260 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 UCK1Q9HA47 277 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 ASH1LQ9NR48 2969 aaKnown RBP17.82■□□□□ 0.44
CHD3-214ENST00000572579 FBXO8Q9NRD0 319 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 RAD18Q9NS91 495 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 TRIM10Q9UDY6 481 aa17.82■□□□□ 0.44
CHD3-214ENST00000572579 MN1Q10571 1320 aaPredicted RBP17.81■□□□□ 0.44
CHD3-214ENST00000572579 VEGFDO43915 354 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 RAD1O60671 282 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 AGTP01019 485 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 RBL1P28749 1068 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 INSCQ1MX18 579 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 BBS12Q6ZW61 710 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 BZW1Q7L1Q6 419 aaKnown RBP17.81■□□□□ 0.44
CHD3-214ENST00000572579 UNC5BQ8IZJ1 945 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 CACNA2D3Q8IZS8 1091 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 ASPSCR1Q9BZE9 553 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 SLC40A1Q9NP59 571 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 STARD5Q9NSY2 213 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 KLHL8Q9P2G9 620 aaPredicted RBP17.81■□□□□ 0.44
CHD3-214ENST00000572579 KCTD3Q9Y597 815 aa17.81■□□□□ 0.44
CHD3-214ENST00000572579 LOC101059948A0A1B0GTJ6 334 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 J3QKU1 62 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 NKX2-8O15522 239 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 KIF1CO43896 1103 aaKnown RBP17.8■□□□□ 0.44
CHD3-214ENST00000572579 ZNF28P17035 718 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 SH3BP2P78314 561 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 NFATC3Q12968 1075 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 ODF2Q5BJF6 829 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 C11orf63Q6NUN7 778 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 AADACL2Q6P093 401 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 FAM151BQ6UXP7 276 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 WASH2PQ6VEQ5 465 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 IPMKQ8NFU5 416 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 DTX3LQ8TDB6 740 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms