RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TEX15Q9BXT5 2789 aa13.2□□□□□ -0.3
CCDC40-205ENST00000571028 C2orf81A6NN90 581 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 ESPNB1AK53 854 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 CCL22O00626 93 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 INPP4BO15327 924 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 STX7O15400 261 aaKnown RBP13.19□□□□□ -0.3
CCDC40-205ENST00000571028 CRTAMO95727 393 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 BPIP17213 487 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 GPR1P46091 355 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 THOP1P52888 689 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 PDX1P52945 283 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 SRSF6Q13247 344 aaKnown RBP13.19□□□□□ -0.3
CCDC40-205ENST00000571028 TAF1AQ15573 450 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-205ENST00000571028 PNCKQ6P2M8 343 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 VASH2Q86V25 355 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 PTRH1Q86Y79 214 aaKnown RBP13.19□□□□□ -0.3
CCDC40-205ENST00000571028 KLHDC8BQ8IXV7 354 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 CBARPQ8N350 705 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-205ENST00000571028 GPR26Q8NDV2 337 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 DENND6BQ8NEG7 585 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 CPT1BQ92523 772 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 GFM1Q96RP9 751 aaKnown RBP13.19□□□□□ -0.3
CCDC40-205ENST00000571028 AGAP2Q99490 1192 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 BOCQ9BWV1 1114 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 DPH5Q9H2P9 285 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 TRABDQ9H4I3 376 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 ARNT2Q9HBZ2 717 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 EIF2B3Q9NR50 452 aaKnown RBP13.19□□□□□ -0.3
CCDC40-205ENST00000571028 GEMIN8Q9NWZ8 242 aaKnown RBP13.19□□□□□ -0.3
CCDC40-205ENST00000571028 MOSPD1Q9UJG1 213 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 PADI4Q9UM07 663 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 DOLKQ9UPQ8 538 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 PKP3Q9Y446 797 aa13.19□□□□□ -0.3
CCDC40-205ENST00000571028 TRPM6Q9BX84 2022 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.18□□□□□ -0.3
CCDC40-205ENST00000571028 EFCAB8A8MWE9 144 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 RAD51CO43502 376 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 NOBOXO60393 691 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 TMEM63AO94886 807 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 SUN1O94901 812 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 HGFP14210 728 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 LPOP22079 712 aaPredicted RBP13.18□□□□□ -0.3
CCDC40-205ENST00000571028 MGAT1P26572 445 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 CRADDP78560 199 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
CCDC40-205ENST00000571028 KCNJ11Q14654 390 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 DOK6Q6PKX4 331 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 FAM151BQ6UXP7 276 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 SYDE1Q6ZW31 735 aaPredicted RBP13.18□□□□□ -0.3
CCDC40-205ENST00000571028 MICALCLQ6ZW33 695 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 TRIM74Q86UV6 250 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 SLC35F3Q8IY50 421 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 OR4K2Q8NGD2 314 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 OR13C4Q8NGS5 318 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 BRSK1Q8TDC3 778 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 SLCO2A1Q92959 643 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 TMEM74Q96NL1 305 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 APOOQ9BUR5 198 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 FOXP3Q9BZS1 431 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 SLC13A1Q9BZW2 595 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 CASS4Q9NQ75 786 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 GULP1Q9UBP9 304 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 FKBPLQ9UIM3 349 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 ACSL6Q9UKU0 697 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 SNX24Q9Y343 169 aa13.18□□□□□ -0.3
CCDC40-205ENST00000571028 DOCK9Q9BZ29 2069 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 CTAGE15A4D2H0 777 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 CACNB4O00305 520 aaPredicted RBP13.17□□□□□ -0.3
CCDC40-205ENST00000571028 DNALI1O14645 258 aaPredicted RBP13.17□□□□□ -0.3
CCDC40-205ENST00000571028 NVLO15381 856 aaKnown RBP13.17□□□□□ -0.3
CCDC40-205ENST00000571028 AVILO75366 819 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 CTAGE8P0CG41 777 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 TPSB2P20231 275 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 PFN3P60673 137 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 CYP4F2P78329 520 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
CCDC40-205ENST00000571028 SLC7A5Q01650 507 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 C1orf61Q13536 156 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 TUBB2AQ13885 445 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 PTK2BQ14289 1009 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 AGERQ15109 404 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 TCEA2Q15560 299 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 TPSAB1Q15661 275 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 ENPP7Q6UWV6 458 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 RD3Q7Z3Z2 195 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 MAATS1Q7Z4T9 603 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 B3GNT8Q7Z7M8 397 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 CTAGE6Q86UF2 777 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 HEATR4Q86WZ0 1026 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 CTAGE4Q8IX94 777 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 PPIL6Q8IXY8 311 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 MNS1Q8NEH6 495 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 SCG3Q8WXD2 468 aaKnown RBP13.17□□□□□ -0.3
CCDC40-205ENST00000571028 DNAJC1Q96KC8 554 aaKnown RBP13.17□□□□□ -0.3
CCDC40-205ENST00000571028 TUBB2BQ9BVA1 445 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 CARD6Q9BX69 1037 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 LGR4Q9BXB1 951 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms