RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 MAP7Q14244 749 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 PPP2R5EQ16537 467 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 MAP9Q49MG5 647 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 ZNF569Q5MCW4 686 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 HP1BP3Q5SSJ5 553 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 SLC9A4Q6AI14 798 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 OGFOD2Q6N063 350 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 PNCKQ6P2M8 343 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 SLC30A9Q6PML9 568 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 CRTC1Q6UUV9 634 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 NXPE4Q6UWF7 544 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 RAD9BQ6WBX8 426 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 Q6ZVL8 140 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 GSTA5Q7RTV2 222 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 EFL1Q7Z2Z2 1120 aaKnown RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 GLT6D1Q7Z4J2 308 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 HSD11B1LQ7Z5J1 315 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 GLRX5Q86SX6 157 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 TSPAN33Q86UF1 283 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 TMPRSS12Q86WS5 348 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 ZSWIM9Q86XI8 627 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 GALNT13Q8IUC8 556 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 EGFL6Q8IUX8 553 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 SLC22A18ASQ8N1D0 253 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 SLC25A41Q8N5S1 370 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 CCDC89Q8N998 374 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 TP53I13Q8NBR0 393 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 FAM71BQ8TC56 605 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 IFI44Q8TCB0 444 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 BLOC1S5Q8TDH9 187 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 HTR3CQ8WXA8 447 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 ADAMTS14Q8WXS8 1223 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 MAML1Q92585 1016 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 KRT35Q92764 455 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 CENPTQ96BT3 561 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 ECHDC3Q96DC8 303 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 NXPE2Q96DL1 559 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 DTD2Q96FN9 168 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 SCRN2Q96FV2 425 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 PDXPQ96GD0 296 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 AHCYL2Q96HN2 611 aaKnown RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 HIC2Q96JB3 615 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 BMFQ96LC9 184 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 APOLD1Q96LR9 279 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 FANCD2OSQ96PS1 177 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 DEPDC7Q96QD5 511 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 KLF6Q99612 283 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 GSDMCQ9BYG8 508 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 SLC25A51Q9H1U9 297 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 OSGEPL1Q9H4B0 414 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 GLOD4Q9HC38 313 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 UCKL1Q9NWZ5 548 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 UBP1Q9NZI7 540 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 CRIM1Q9NZV1 1036 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 AKAP7Q9P0M2 348 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 ZC3H7BQ9UGR2 993 aaKnown RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 FAM153AQ9UHL3 310 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 ZNHIT2Q9UHR6 403 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 DCTN4Q9UJW0 460 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 TRHDEQ9UKU6 1024 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 SHOC2Q9UQ13 582 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 CLCA2Q9UQC9 943 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 AAR2Q9Y312 384 aaKnown RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 MSRB2Q9Y3D2 182 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 PKP3Q9Y446 797 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 PCDHGA1Q9Y5H4 931 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 PCDHA3Q9Y5H8 950 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 CSNK1G3Q9Y6M4 447 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 COL5A1P20908 1838 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 TPRP12270 2363 aaKnown RBP4.8□□□□□ -1.64
CNOT1-219ENST00000569882 PTPRBP23467 1997 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 MYLKQ15746 1914 aa4.8□□□□□ -1.64
CNOT1-219ENST00000569882 ZFC3H1O60293 1989 aaKnown RBP4.79□□□□□ -1.64
CNOT1-219ENST00000569882 GRID2IPA4D2P6 1211 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 C3orf70A6NLC5 250 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-219ENST00000569882 C2orf81A6NN90 581 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 BTNL10A8MVZ5 291 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 ANKRD66B4E2M5 251 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 LMO7DNF2Z398 122 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 TRIM38O00635 465 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 TPP1O14773 563 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 PJA2O43164 708 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 SNX2O60749 519 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 CBFA2T3O75081 653 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 PEX14O75381 377 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 SLC25A14O95258 325 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-219ENST00000569882 CLDN7O95471 211 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 NDST3O95803 873 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 TOP3BO95985 862 aaKnown RBP4.79□□□□□ -1.64
CNOT1-219ENST00000569882 PEX11BO96011 259 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 MT-CYBP00156 380 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-219ENST00000569882 PDHA1P08559 390 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 GSTP1P09211 210 aaKnown RBP4.79□□□□□ -1.64
CNOT1-219ENST00000569882 PIRTP0C851 137 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 RBP3P10745 1247 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 SLC2A4P14672 509 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 PECAM1P16284 738 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-219ENST00000569882 VCLP18206 1134 aa4.79□□□□□ -1.64
CNOT1-219ENST00000569882 PTPN3P26045 913 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms