RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 CA5AP35218 305 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 HMGCLP35914 325 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 SPINT3P49223 89 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 ARSDP51689 593 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 ARL4CP56559 192 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 TMPRSS15P98073 1019 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 CYP4F3Q08477 520 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 SEPT6Q14141 434 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 PCID2Q5JVF3 399 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 WDR93Q6P2C0 686 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 ADAMTSL4Q6UY14 1074 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 GLT6D1Q7Z4J2 308 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 CCDC25Q86WR0 208 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 PROSER1Q86XN7 944 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 ZBED8Q8IZ13 594 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 UNC5BQ8IZJ1 945 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 ARL10Q8N8L6 244 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 DCBLD1Q8N8Z6 715 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 EIF1ADQ8N9N8 165 aaKnown RBP9.3□□□□□ -0.92
UBR1-210ENST00000569337 FAM46DQ8NEK8 389 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 OR4K2Q8NGD2 314 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 OR13C4Q8NGS5 318 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 OR13J1Q8NGT2 312 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 MFSD3Q96ES6 412 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 STAMBPL1Q96FJ0 436 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 DNAJC1Q96KC8 554 aaKnown RBP9.3□□□□□ -0.92
UBR1-210ENST00000569337 DEPDC7Q96QD5 511 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 FMO2Q99518 471 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 EBNA1BP2Q99848 306 aaKnown RBP9.3□□□□□ -0.92
UBR1-210ENST00000569337 RIOK2Q9BVS4 552 aaKnown RBP9.3□□□□□ -0.92
UBR1-210ENST00000569337 FRMD8Q9BZ67 464 aaPredicted RBP9.3□□□□□ -0.92
UBR1-210ENST00000569337 TXLNGYQ9BZA5 131 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 GPR63Q9BZJ6 419 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 FAM129AQ9BZQ8 928 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 IL22Q9GZX6 179 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 DPEP2Q9H4A9 486 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 FAM83DQ9H4H8 585 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 TRABDQ9H4I3 376 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 TREX1Q9NSU2 369 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 PKD2L2Q9NZM6 624 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 HACD3Q9P035 362 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 CHMP2BQ9UQN3 213 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 MAD1L1Q9Y6D9 718 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 AK5Q9Y6K8 562 aa9.3□□□□□ -0.92
UBR1-210ENST00000569337 TP53BP1Q12888 1972 aaPredicted RBP9.3□□□□□ -0.92
UBR1-210ENST00000569337 ZCWPW2A0A1B0GU75 182 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 HEATR9A2RTY3 570 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 RGSL1A5PLK6 1076 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 SRRM3A6NNA2 597 aaPredicted RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 AP3B1O00203 1094 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 GAPDHSO14556 408 aaPredicted RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 INPP4BO15327 924 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 EIF3HO15372 352 aaKnown RBP eCLIP9.29□□□□□ -0.92
UBR1-210ENST00000569337 KRT37O76014 449 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 ASMTLO95671 621 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 SOD1P00441 154 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 FUCA1P04066 466 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 BPIP17213 487 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 LPOP22079 712 aaPredicted RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 ARNTP27540 789 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 MAGEA4P43358 317 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 GNPDA1P46926 289 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 POLD2P49005 469 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 GPX6P59796 221 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 ILF3Q12906 894 aaKnown RBP eCLIP9.29□□□□□ -0.92
UBR1-210ENST00000569337 ANKRD20A4Q4UJ75 823 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 DNAJC21Q5F1R6 531 aaKnown RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 PERM1Q5SV97 790 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 TSTD2Q5T7W7 516 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 CDCP2Q5VXM1 449 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 STEAP4Q687X5 459 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 CASC4Q6P4E1 433 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 DOK6Q6PKX4 331 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 UNC5AQ6ZN44 842 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 CENPUQ71F23 418 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 TMEM135Q86UB9 458 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 GPR26Q8NDV2 337 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 FBXO36Q8NEA4 188 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 PPHLN1Q8NEY8 458 aaKnown RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 OR6C4Q8NGE1 309 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 CCL4L1Q8NHW4 92 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 WDR48Q8TAF3 677 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 AENQ8WTP8 325 aaKnown RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 NXPE2Q96DL1 559 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 CFAP36Q96G28 342 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 HIC2Q96JB3 615 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 C9orf72Q96LT7 481 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 SRPK1Q96SB4 655 aaKnown RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 AGAP2Q99490 1192 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 CCDC3Q9BQI4 270 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 GSDMCQ9BYG8 508 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 FOXP3Q9BZS1 431 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 NRSN2Q9GZP1 204 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 EPB41L4BQ9H329 900 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 MRM3Q9HC36 420 aaKnown RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 NLE1Q9NVX2 485 aaPredicted RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 TRNAU1APQ9NX07 287 aaKnown RBP9.29□□□□□ -0.92
UBR1-210ENST00000569337 IL1RAPL1Q9NZN1 696 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 DKK4Q9UBT3 224 aa9.29□□□□□ -0.92
UBR1-210ENST00000569337 MTRF1LQ9UGC7 380 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms