RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 SH3KBP1Q96B97 665 aa20.01■□□□□ 0.79
CLK3-225ENST00000569063 CRELD1Q96HD1 420 aa20.01■□□□□ 0.79
CLK3-225ENST00000569063 NAF1Q96HR8 494 aaKnown RBP20.01■□□□□ 0.79
CLK3-225ENST00000569063 SLC38A3Q99624 504 aa20.01■□□□□ 0.79
CLK3-225ENST00000569063 DPYSL5Q9BPU6 564 aa20.01■□□□□ 0.79
CLK3-225ENST00000569063 APOL2Q9BQE5 337 aa20.01■□□□□ 0.79
CLK3-225ENST00000569063 STN1Q9H668 368 aaKnown RBP20.01■□□□□ 0.79
CLK3-225ENST00000569063 FEZ2Q9UHY8 353 aaPredicted RBP20.01■□□□□ 0.79
CLK3-225ENST00000569063 ITPR1Q14643 2758 aa20.01■□□□□ 0.79
CLK3-225ENST00000569063 BPTFQ12830 3046 aa20.01■□□□□ 0.79
CLK3-225ENST00000569063 UNC13CQ8NB66 2214 aa20■□□□□ 0.79
CLK3-225ENST00000569063 IGHV5-10-1A0A0J9YXX1 117 aa20■□□□□ 0.79
CLK3-225ENST00000569063 UGT1A9O60656 530 aa20■□□□□ 0.79
CLK3-225ENST00000569063 JMJD7P0C870 316 aa20■□□□□ 0.79
CLK3-225ENST00000569063 HGFP14210 728 aa20■□□□□ 0.79
CLK3-225ENST00000569063 HOXB3P14651 431 aaPredicted RBP20■□□□□ 0.79
CLK3-225ENST00000569063 UGT1A6P19224 532 aa20■□□□□ 0.79
CLK3-225ENST00000569063 UGT1A1P22309 533 aa20■□□□□ 0.79
CLK3-225ENST00000569063 UGT1A4P22310 534 aa20■□□□□ 0.79
CLK3-225ENST00000569063 UGT1A3P35503 534 aa20■□□□□ 0.79
CLK3-225ENST00000569063 LIMK2P53671 638 aa20■□□□□ 0.79
CLK3-225ENST00000569063 CFHR1Q03591 330 aa20■□□□□ 0.79
CLK3-225ENST00000569063 GTF2H3Q13889 308 aa20■□□□□ 0.79
CLK3-225ENST00000569063 PTPRCAPQ14761 206 aa20■□□□□ 0.79
CLK3-225ENST00000569063 INSCQ1MX18 579 aa20■□□□□ 0.79
CLK3-225ENST00000569063 NKAIN2Q5VXU1 208 aa20■□□□□ 0.79
CLK3-225ENST00000569063 KCTD11Q693B1 232 aa20■□□□□ 0.79
CLK3-225ENST00000569063 ZNF662Q6ZS27 426 aa20■□□□□ 0.79
CLK3-225ENST00000569063 ARHGEF18Q6ZSZ5 1173 aa20■□□□□ 0.79
CLK3-225ENST00000569063 LRRC45Q96CN5 670 aa20■□□□□ 0.79
CLK3-225ENST00000569063 C19orf43Q9BQ61 176 aa20■□□□□ 0.79
CLK3-225ENST00000569063 TBL1YQ9BQ87 522 aa20■□□□□ 0.79
CLK3-225ENST00000569063 TMEM121Q9BTD3 319 aa20■□□□□ 0.79
CLK3-225ENST00000569063 ZCCHC2Q9C0B9 1178 aaKnown RBP20■□□□□ 0.79
CLK3-225ENST00000569063 PRORYQ9H606 182 aa20■□□□□ 0.79
CLK3-225ENST00000569063 UGT1A7Q9HAW7 530 aa20■□□□□ 0.79
CLK3-225ENST00000569063 UGT1A10Q9HAW8 530 aa20■□□□□ 0.79
CLK3-225ENST00000569063 UGT1A8Q9HAW9 530 aa20■□□□□ 0.79
CLK3-225ENST00000569063 SMOXQ9NWM0 555 aa20■□□□□ 0.79
CLK3-225ENST00000569063 CPNE7Q9UBL6 633 aa20■□□□□ 0.79
CLK3-225ENST00000569063 SSUH2Q9Y2M2 353 aa20■□□□□ 0.79
CLK3-225ENST00000569063 KIF26BQ2KJY2 2108 aa20■□□□□ 0.79
CLK3-225ENST00000569063 HGSO14964 777 aaPredicted RBP19.99■□□□□ 0.79
CLK3-225ENST00000569063 XRCC1P18887 633 aaPredicted RBP19.99■□□□□ 0.79
CLK3-225ENST00000569063 CSF2RBP32927 897 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 PDE1BQ01064 536 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 TRA2AQ13595 282 aaKnown RBP eCLIP19.99■□□□□ 0.79
CLK3-225ENST00000569063 C16orf72Q14CZ0 275 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 PLA2G4EQ3MJ16 856 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 WASH2PQ6VEQ5 465 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 C11orf96Q7Z7L8 435 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 ZNF761Q86XN6 746 aaPredicted RBP19.99■□□□□ 0.79
CLK3-225ENST00000569063 LRRC8AQ8IWT6 810 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 RASGEF1AQ8N9B8 481 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 OR4K2Q8NGD2 314 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 OR10G6Q8NH81 332 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 ZNF398Q8TD17 642 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 TTC25Q96NG3 672 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.99■□□□□ 0.79
CLK3-225ENST00000569063 OSGEPL1Q9H4B0 414 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 WASH6PQ9NQA3 447 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 AKAP7Q9P0M2 348 aaPredicted RBP19.99■□□□□ 0.79
CLK3-225ENST00000569063 PISDQ9UG56 409 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 ACSL6Q9UKU0 697 aa19.99■□□□□ 0.79
CLK3-225ENST00000569063 NVLO15381 856 aaKnown RBP19.98■□□□□ 0.79
CLK3-225ENST00000569063 GPR39O43194 453 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 KCNJ13O60928 360 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 PRAMEF1O95521 474 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 METTL18O95568 372 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 CRTAMO95727 393 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 SLC5A2P31639 672 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 CA5AP35218 305 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 EPHA4P54764 986 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 GDF10P55107 478 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 UBE2IP63279 158 aaKnown RBP19.98■□□□□ 0.79
CLK3-225ENST00000569063 NFATC2Q13469 925 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 SPARCL1Q14515 664 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 P3H1Q32P28 736 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 GPRC6AQ5T6X5 926 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 SEL1L2Q5TEA6 688 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 MEI1Q5TIA1 1274 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 BROXQ5VW32 411 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 TMEM71Q6P5X7 295 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 WDR74Q6RFH5 385 aaPredicted RBP19.98■□□□□ 0.79
CLK3-225ENST00000569063 ABRAXAS1Q6UWZ7 409 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 TRAPPC5Q8IUR0 188 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 RTP4Q96DX8 246 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 AHCYL2Q96HN2 611 aaKnown RBP19.98■□□□□ 0.79
CLK3-225ENST00000569063 CCDC74BQ96LY2 380 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 FRMD8P1Q9BZ68 369 aaPredicted RBP19.98■□□□□ 0.79
CLK3-225ENST00000569063 B3GNT4Q9C0J1 378 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 UCK1Q9HA47 277 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 SCHIP1Q9P0W5 487 aaPredicted RBP19.98■□□□□ 0.79
CLK3-225ENST00000569063 PDP2Q9P2J9 529 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 DNAJC16Q9Y2G8 782 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 KCTD3Q9Y597 815 aa19.98■□□□□ 0.79
CLK3-225ENST00000569063 KLK10O43240 276 aa19.97■□□□□ 0.79
CLK3-225ENST00000569063 DUX1O43812 170 aa19.97■□□□□ 0.79
CLK3-225ENST00000569063 SRP72O76094 671 aaKnown RBP19.97■□□□□ 0.79
CLK3-225ENST00000569063 CCDC175P0C221 793 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms