RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 R3HDM2Q9Y2K5 976 aaKnown RBP28.98■■■□□ 2.23
RAB40C-211ENST00000568586 MGAQ8IWI9 3026 aa28.98■■■□□ 2.23
RAB40C-211ENST00000568586 TRBV23OR9-2A0A075B6M9 112 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 HGSO14964 777 aaPredicted RBP28.97■■■□□ 2.23
RAB40C-211ENST00000568586 NVLO15381 856 aaKnown RBP28.97■■■□□ 2.23
RAB40C-211ENST00000568586 KRT86O43790 486 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 MTX2O75431 263 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 HOXB3P14651 431 aaPredicted RBP28.97■■■□□ 2.23
RAB40C-211ENST00000568586 LPOP22079 712 aaPredicted RBP28.97■■■□□ 2.23
RAB40C-211ENST00000568586 HHEXQ03014 270 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 PARP6Q2NL67 630 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 KCTD11Q693B1 232 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 WASH2PQ6VEQ5 465 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 CCDC112Q8NEF3 446 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 DDHD1Q8NEL9 900 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 WASH6PQ9NQA3 447 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 PRDM8Q9NQV8 689 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 FEZ2Q9UHY8 353 aaPredicted RBP28.97■■■□□ 2.23
RAB40C-211ENST00000568586 ARL5AQ9Y689 179 aa28.97■■■□□ 2.23
RAB40C-211ENST00000568586 SMG1Q96Q15 3661 aaKnown RBP28.97■■■□□ 2.23
RAB40C-211ENST00000568586 TCRBV7S2A1N4TA0A589 114 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 STX7O15400 261 aaKnown RBP28.96■■■□□ 2.23
RAB40C-211ENST00000568586 KCNJ13O60928 360 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 HGFP14210 728 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 XRCC1P18887 633 aaPredicted RBP28.96■■■□□ 2.23
RAB40C-211ENST00000568586 CSF2RBP32927 897 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 UBE2IP63279 158 aaKnown RBP28.96■■■□□ 2.23
RAB40C-211ENST00000568586 OLIG2Q13516 323 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 ITGA9Q13797 1035 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 C16orf72Q14CZ0 275 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 LDLRAP1Q5SW96 308 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 NKAIN2Q5VXU1 208 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 CRTC3Q6UUV7 619 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 ABRAXAS1Q6UWZ7 409 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 FAM151BQ6UXP7 276 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 SLC9B2Q86UD5 537 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 FAM71DQ8N9W8 422 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 SLC38A3Q99624 504 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 UCK1Q9HA47 277 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 CPNE7Q9UBL6 633 aa28.96■■■□□ 2.23
RAB40C-211ENST00000568586 C2orf81A6NN90 581 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 BUD23O43709 281 aaKnown RBP28.95■■■□□ 2.22
RAB40C-211ENST00000568586 UGT1A9O60656 530 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 SNX2O60749 519 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 UGT1A6P19224 532 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 UGT1A1P22309 533 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 UGT1A4P22310 534 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 CA5AP35218 305 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 UGT1A3P35503 534 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 EPHA4P54764 986 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 PHF19Q5T6S3 580 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 AGAP9Q5VTM2 703 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 TMEM71Q6P5X7 295 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 RTP4Q96DX8 246 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 APOL2Q9BQE5 337 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 STN1Q9H668 368 aaKnown RBP28.95■■■□□ 2.22
RAB40C-211ENST00000568586 UGT1A7Q9HAW7 530 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 UGT1A10Q9HAW8 530 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 UGT1A8Q9HAW9 530 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 GUCA1BQ9UMX6 200 aa28.95■■■□□ 2.22
RAB40C-211ENST00000568586 AGAP14A8MT82 685 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 PTMAP06454 111 aaKnown RBP28.94■■■□□ 2.22
RAB40C-211ENST00000568586 JMJD7P0C870 316 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 THRAP10827 490 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 SLC5A2P31639 672 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 UCNP55089 124 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 PDE1BQ01064 536 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 PTPRCAPQ14761 206 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 INSCQ1MX18 579 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 WDR74Q6RFH5 385 aaPredicted RBP28.94■■■□□ 2.22
RAB40C-211ENST00000568586 OR10G6Q8NH81 332 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 ZNF398Q8TD17 642 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 NAF1Q96HR8 494 aaKnown RBP28.94■■■□□ 2.22
RAB40C-211ENST00000568586 TBL1YQ9BQ87 522 aa28.94■■■□□ 2.22
RAB40C-211ENST00000568586 LDHAL6BQ9BYZ2 381 aaPredicted RBP28.94■■■□□ 2.22
RAB40C-211ENST00000568586 FRMD8P1Q9BZ68 369 aaPredicted RBP28.94■■■□□ 2.22
RAB40C-211ENST00000568586 ZCCHC2Q9C0B9 1178 aaKnown RBP28.94■■■□□ 2.22
RAB40C-211ENST00000568586 SCHIP1Q9P0W5 487 aaPredicted RBP28.94■■■□□ 2.22
RAB40C-211ENST00000568586 DNMT3AQ9Y6K1 912 aaPredicted RBP28.94■■■□□ 2.22
RAB40C-211ENST00000568586 METTL18O95568 372 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 DMPKQ09013 629 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 GPRC6AQ5T6X5 926 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 ARHGEF18Q6ZSZ5 1173 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 RASGEF1AQ8N9B8 481 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 OR4K2Q8NGD2 314 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 CCDC74BQ96LY2 380 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 EPB41L1Q9H4G0 881 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 AKAP7Q9P0M2 348 aaPredicted RBP28.93■■■□□ 2.22
RAB40C-211ENST00000568586 PISDQ9UG56 409 aa28.93■■■□□ 2.22
RAB40C-211ENST00000568586 LILRA5A6NI73 299 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 GPR39O43194 453 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 KLK10O43240 276 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 DUX1O43812 170 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 CRTAMO95727 393 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 ITIH1P19827 911 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 ETV5P41161 510 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 GDF10P55107 478 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 XIAPP98170 497 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 GTF2H3Q13889 308 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 ZNF761Q86XN6 746 aaPredicted RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms