RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 LRRTM4Q86VH4 590 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 AVL9Q8NBF6 648 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 GDAP1Q8TB36 358 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 ALG3Q92685 438 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 FICDQ9BVA6 458 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 WDR70Q9NW82 654 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 IL17CQ9P0M4 197 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 AMFRQ9UKV5 643 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 SSUH2Q9Y2M2 353 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 SCN8AQ9UQD0 1980 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 LOC400499M0QZD8 3231 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 PRAMEF33A0A0G2JMD5 474 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 KCNN4O15554 427 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 PRAMEF10O60809 474 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 MTX2O75431 263 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 ZNF189O75820 626 aaPredicted RBP14.24□□□□□ -0.13
CMTM3-215ENST00000568477 CDK14O94921 469 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 PYGMP11217 842 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 ZNF7P17097 686 aaPredicted RBP14.24□□□□□ -0.13
CMTM3-215ENST00000568477 VAC14Q08AM6 782 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 PRPSAP1Q14558 356 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 PLA2G4EQ3MJ16 856 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 KHDC1Q4VXA5 237 aaKnown RBP14.24□□□□□ -0.13
CMTM3-215ENST00000568477 TMEM164Q5U3C3 297 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 AADACL2Q6P093 401 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 TMEM71Q6P5X7 295 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 SYCE1Q8N0S2 351 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 UBL4BQ8N7F7 174 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 AGBL5Q8NDL9 886 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 RCBTB1Q8NDN9 531 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 DTX3LQ8TDB6 740 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 USP7Q93009 1102 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 TIMM29Q9BSF4 260 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 DESI2Q9BSY9 194 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.24□□□□□ -0.13
CMTM3-215ENST00000568477 ZCCHC2Q9C0B9 1178 aaKnown RBP14.24□□□□□ -0.13
CMTM3-215ENST00000568477 IL26Q9NPH9 171 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 PRDM8Q9NQV8 689 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.24□□□□□ -0.134e-6■■□□□ 12.2
CMTM3-215ENST00000568477 CPNE7Q9UBL6 633 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 TMPRSS11EQ9UL52 423 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
CMTM3-215ENST00000568477 GLYATL1P3A0A0U1RQE8 302 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 GOLGA6L9A6NEM1 432 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 PDZK1P1A8MUH7 402 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 MIF4GDA9UHW6 222 aaKnown RBP14.23□□□□□ -0.13
CMTM3-215ENST00000568477 ATXN7O15265 892 aaPredicted RBP14.23□□□□□ -0.13
CMTM3-215ENST00000568477 ZSCAN12O43309 604 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 BUD23O43709 281 aaKnown RBP14.23□□□□□ -0.13
CMTM3-215ENST00000568477 PPFIA2O75334 1257 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 AGTP01019 485 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 TUBB4AP04350 444 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 THRAP10827 490 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 LIPCP11150 499 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 CCL4P13236 92 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 VCLP18206 1134 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 PSMB4P28070 264 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 CSTF2P33240 577 aaKnown RBP eCLIP14.23□□□□□ -0.13
CMTM3-215ENST00000568477 EPHA4P54764 986 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 CFHR1Q03591 330 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 CHRNA6Q15825 494 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 ANKRD20A2Q5SQ80 823 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 ANKRD20A1Q5TYW2 823 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 ANKRD20A3Q5VUR7 823 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 FAM151BQ6UXP7 276 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 TRAPPC5Q8IUR0 188 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 BRSK1Q8TDC3 778 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 SPATA13Q96N96 652 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 TTC25Q96NG3 672 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 PPP1R2P1Q96PQ5 205 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 CCNL2Q96S94 520 aaPredicted RBP14.23□□□□□ -0.13
CMTM3-215ENST00000568477 FAM118BQ9BPY3 351 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 B3GNT4Q9C0J1 378 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 EPB41L1Q9H4G0 881 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 FOXJ2Q9P0K8 574 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 TMEM9Q9P0T7 183 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 TRIM10Q9UDY6 481 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 SLC23A2Q9UGH3 650 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 DNAJC16Q9Y2G8 782 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 AAR2Q9Y312 384 aaKnown RBP14.23□□□□□ -0.13
CMTM3-215ENST00000568477 MGAQ8IWI9 3026 aa14.23□□□□□ -0.13
CMTM3-215ENST00000568477 LILRA5A6NI73 299 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 C9orf172C9J069 976 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 KIF2AO00139 706 aaPredicted RBP14.22□□□□□ -0.13
CMTM3-215ENST00000568477 STX7O15400 261 aaKnown RBP14.22□□□□□ -0.13
CMTM3-215ENST00000568477 FTCDO95954 541 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 MPSTP25325 297 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 CD82P27701 267 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 ADRA1AP35348 466 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 MAPK9P45984 424 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 UBE2IP63279 158 aaKnown RBP14.22□□□□□ -0.13
CMTM3-215ENST00000568477 RHDQ02161 417 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 TMEM115Q12893 351 aaPredicted RBP14.22□□□□□ -0.13
CMTM3-215ENST00000568477 ITGA9Q13797 1035 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 LDLRAP1Q5SW96 308 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 WDR74Q6RFH5 385 aaPredicted RBP14.22□□□□□ -0.13
CMTM3-215ENST00000568477 CCDC81Q6ZN84 652 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 ZNF547Q8IVP9 402 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 TRIM48Q8IWZ4 208 aa14.22□□□□□ -0.13
CMTM3-215ENST00000568477 TTC13Q8NBP0 860 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms