RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CDH15P55291 814 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 EFR3AQ14156 821 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 POSTNQ15063 836 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 TEAD2Q15562 447 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 ISCA2Q86U28 154 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 ZNF584Q8IVC4 421 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 UTP15Q8TED0 518 aaKnown RBP1.99□□□□□ -2.09
SMG1-212ENST00000566328 POF1BQ8WVV4 589 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 TMEM143Q96AN5 459 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 MAGED4Q96JG8 741 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 TMEM47Q9BQJ4 181 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 REEP2Q9BRK0 252 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 HEMGNQ9BXL5 484 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 SIL1Q9H173 461 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 LTB4R2Q9NPC1 389 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 PLCB1Q9NQ66 1216 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 COQ3Q9NZJ6 369 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 HSPB7Q9UBY9 170 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 CNOT7Q9UIV1 285 aaKnown RBP1.99□□□□□ -2.09
SMG1-212ENST00000566328 RARRES3Q9UL19 164 aa1.99□□□□□ -2.09
SMG1-212ENST00000566328 IGKV6D-21A0A0A0MT36 114 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 TEX13CA0A0J9YWL9 993 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 A0A1W2PP11 408 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 KPNA7A9QM74 516 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 USP17L23D6RBM5 183 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 M0QZ24 198 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 IRAK2O43187 625 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 TCEA3O75764 348 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 CSPG5O95196 566 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 LIPFP07098 398 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 KRT19P08727 400 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 UBA1P22314 1058 aaKnown RBP1.98□□□□□ -2.09
SMG1-212ENST00000566328 ELAVL2Q12926 359 aaKnown RBP1.98□□□□□ -2.09
SMG1-212ENST00000566328 DRAP1Q14919 205 aaPredicted RBP1.98□□□□□ -2.09
SMG1-212ENST00000566328 PDCD2Q16342 344 aaPredicted RBP1.98□□□□□ -2.09
SMG1-212ENST00000566328 NFIL3Q16649 462 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 HSP90AB2PQ58FF8 381 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 DPPA4Q7L190 304 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 FASTKD5Q7L8L6 764 aaKnown RBP1.98□□□□□ -2.09
SMG1-212ENST00000566328 LSMEM2Q8N112 164 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 GBGT1Q8N5D6 347 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 NGEFQ8N5V2 710 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 RILPL2Q969X0 211 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 ELP4Q96EB1 424 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 CYYR1Q96J86 154 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 RAB11FIP5Q9BXF6 653 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 INTS2Q9H0H0 1204 aaKnown RBP1.98□□□□□ -2.09
SMG1-212ENST00000566328 ZNF700Q9H0M5 742 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 P2RY12Q9H244 342 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 PANK3Q9H999 370 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 RABGAP1Q9Y3P9 1069 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 SCINQ9Y6U3 715 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 SHROOM4Q9ULL8 1493 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 PRAG1Q86YV5 1406 aa1.98□□□□□ -2.09
SMG1-212ENST00000566328 PRRC2AP48634 2157 aaKnown RBP1.98□□□□□ -2.09
SMG1-212ENST00000566328 hCG_1642624A0A1W2PR95 340 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 PLK4O00444 970 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 GPR137BO60478 399 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 SYNCRIPO60506 623 aaKnown RBP1.97□□□□□ -2.09
SMG1-212ENST00000566328 DUX4L4P0CJ87 422 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 COX7A2P14406 83 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 UGT1A4P22310 534 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 CDAP32320 146 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 PGM1P36871 562 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 GRAPQ13588 217 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 SLC12A1Q13621 1099 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 TRIM14Q14142 442 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 SGSM1Q2NKQ1 1148 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 TAF1BQ53T94 588 aaPredicted RBP1.97□□□□□ -2.09
SMG1-212ENST00000566328 C2CD6Q53TS8 623 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 HIST2H2BDQ6DRA6 164 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 Q6ZSR9 355 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 Q75L30 129 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 ZCCHC10Q8TBK6 192 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 ZPLD1Q8TCW7 415 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 RASL10AQ92737 203 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 PABPC5Q96DU9 382 aaKnown RBP1.97□□□□□ -2.09
SMG1-212ENST00000566328 OMA1Q96E52 524 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 PRAC1Q96KF2 57 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 ACOX2Q99424 681 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 LRRC61Q9BV99 259 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 PHF7Q9BWX1 381 aaPredicted RBP1.97□□□□□ -2.09
SMG1-212ENST00000566328 TRIM6Q9C030 488 aaPredicted RBP1.97□□□□□ -2.09
SMG1-212ENST00000566328 LAT2Q9GZY6 243 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 CHST11Q9NPF2 352 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 CLIP2Q9UDT6 1046 aa1.97□□□□□ -2.09
SMG1-212ENST00000566328 LIMA1Q9UHB6 759 aaKnown RBP1.97□□□□□ -2.09
SMG1-212ENST00000566328 LRRC53A6NM62 1247 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 NGFP01138 241 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 EPHA2P29317 976 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 PSMC2P35998 433 aaKnown RBP1.96□□□□□ -2.1
SMG1-212ENST00000566328 HNF4AP41235 474 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 CTSCP53634 463 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 HNRNPDQ14103 355 aaKnown RBP1.96□□□□□ -2.1
SMG1-212ENST00000566328 RRS1Q15050 365 aaKnown RBP1.96□□□□□ -2.1
SMG1-212ENST00000566328 NDUFAF5Q5TEU4 345 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 NAA35Q5VZE5 725 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 ATG16L1Q676U5 607 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 PSRC1Q6PGN9 363 aaPredicted RBP1.96□□□□□ -2.1
SMG1-212ENST00000566328 CCDC174Q6PII3 467 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms