RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TGM1P22735 817 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 MPLP40238 635 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 CDKN1CP49918 316 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-206ENST00000565990 SEC24CP53992 1094 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 SLC18A1P54219 525 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 GPX6P59796 221 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 FZD2Q14332 565 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 NFATC4Q14934 902 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 LONRF1Q17RB8 773 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 LYPLAL1Q5VWZ2 237 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 ZNF449Q6P9G9 518 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 AFTPHQ6ULP2 937 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 HEATR4Q86WZ0 1026 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 LMNTD2Q8IXW0 634 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 PIANPQ8IYJ0 282 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 DDHD1Q8NEL9 900 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 OR6P1Q8NGX9 317 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 ZNF669Q96BR6 464 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-206ENST00000565990 ULK4Q96C45 1275 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 GRAMD1AQ96CP6 724 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 TTC25Q96NG3 672 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 WDR26Q9H7D7 661 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 LRRC4CQ9HCJ2 640 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 FAM86C1Q9NVL1 165 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 CHMP2BQ9UQN3 213 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 ANKRD6Q9Y2G4 727 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 SLC30A1Q9Y6M5 507 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 CAPN7Q9Y6W3 813 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 A0A1B0GVT2 93 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 CFAP73A6NFT4 308 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 TMEM202A6NGA9 273 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 OR51F1A6NGY5 319 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 GPR89AB7ZAQ6 455 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 CACNB4O00305 520 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 CHUKO15111 745 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 GPR89BP0CG08 455 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 KELP23276 732 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 HTR1BP28222 390 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 CTSKP43235 329 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 PRAMEP78395 509 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 IRX4P78413 519 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 NHLH1Q02575 133 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 TMEM115Q12893 351 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 IFT88Q13099 833 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 EIF2B5Q13144 721 aaKnown RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 PDE1CQ14123 709 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 SEMA3AQ14563 771 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 CRYMQ14894 314 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 KIF19Q2TAC6 998 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 LDLRAP1Q5SW96 308 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 TTC19Q6DKK2 380 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 PSAPL1Q6NUJ1 521 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 NEPROQ6NW34 567 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 MACC1Q6ZN28 852 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 C3orf62Q6ZUJ4 267 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 PTAR1Q7Z6K3 402 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 ADGRG6Q86SQ4 1221 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 CNTN4Q8IWV2 1026 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 PALM2Q8IXS6 379 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 HEXDCQ8WVB3 486 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 C9orf72Q96LT7 481 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 WDR92Q96MX6 357 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 TCF12Q99081 682 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 ZDHHC5Q9C0B5 715 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 FAM96AQ9H5X1 160 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 RMI1Q9H9A7 625 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 SENP1Q9P0U3 644 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 PNMA8BQ9ULN7 279 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 FNDC3AQ9Y2H6 1198 aaKnown RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 OAS3Q9Y6K5 1087 aaKnown RBP12.48□□□□□ -0.41
SF3B3-206ENST00000565990 DGKBQ9Y6T7 804 aa12.48□□□□□ -0.41
SF3B3-206ENST00000565990 ZFC3H1O60293 1989 aaKnown RBP12.47□□□□□ -0.41
SF3B3-206ENST00000565990 PATE3B3GLJ2 98 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 KHNYNO15037 678 aaKnown RBP12.47□□□□□ -0.41
SF3B3-206ENST00000565990 INPP4BO15327 924 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 GPR39O43194 453 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 VEGFDO43915 354 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 NUAK1O60285 661 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 DFNA5O60443 496 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 RASSF9O75901 435 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 S1PR4O95977 384 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 C1QAP02745 245 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 PRSS56P0CW18 603 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 CHN1P15882 459 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 ACRV1P26436 265 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 SSTR1P30872 391 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 HNRNPH1P31943 449 aaKnown RBP12.47□□□□□ -0.41
SF3B3-206ENST00000565990 RXRGP48443 463 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 THOP1P52888 689 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 B4GALNT1Q00973 533 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 KYNUQ16719 465 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 ZNF423Q2M1K9 1284 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 KHDC1Q4VXA5 237 aaKnown RBP12.47□□□□□ -0.41
SF3B3-206ENST00000565990 FASTKD1Q53R41 847 aaKnown RBP12.47□□□□□ -0.41
SF3B3-206ENST00000565990 TRIM61Q5EBN2 209 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 ZRANB3Q5FWF4 1079 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 GPRC6AQ5T6X5 926 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 SERPINA9Q86WD7 417 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms