RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 BMPR1AP36894 532 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ME1P48163 572 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 GPR15P49685 360 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 CLCNKAP51800 687 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 HK3P52790 923 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 MANFP55145 182 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 SNU13P55769 128 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 EIF3BP55884 814 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 KIAA1024LP59773 190 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 EEF1A1P68104 462 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 EEF1A2Q05639 463 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 TUBB2AQ13885 445 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 TOB2Q14106 344 aaPredicted RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 SLC29A2Q14542 456 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 IL11RAQ14626 422 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 KRT31Q15323 416 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 FAM187BQ17R55 369 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 SLC36A3Q495N2 470 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 BCL7AQ4VC05 210 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 LRRC73Q5JTD7 316 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 RNASEH2BQ5TBB1 312 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 EEF1A1P5Q5VTE0 462 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ZNF425Q6IV72 752 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 UNQ6494/PRO21346Q6UXR6 183 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 CLEC17AQ6ZS10 378 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ZBTB49Q6ZSB9 765 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 CYFIP1Q7L576 1253 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 CDR2LQ86X02 465 aaPredicted RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 ARHGAP18Q8N392 663 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ZNF786Q8N393 782 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 FBXO39Q8N4B4 442 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 IL17RCQ8NAC3 791 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 TMEM116Q8NCL8 245 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 CCDC112Q8NEF3 446 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 SUN3Q8TAQ9 357 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ZCCHC14Q8WYQ9 949 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 NEIL1Q96FI4 390 aaPredicted RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 PGM2Q96G03 612 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 RAX2Q96IS3 184 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 C11orf84Q9BUA3 381 aaPredicted RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 TUBB2BQ9BVA1 445 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 TLR10Q9BXR5 811 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 RTN4RQ9BZR6 473 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 NAPBQ9H115 298 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 CHST8Q9H2A9 424 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 C11orf49Q9H6J7 331 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 UBTD1Q9HAC8 227 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 NRBP2Q9NSY0 501 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 NUDT15Q9NV35 164 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 RDH8Q9NYR8 311 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PEMTQ9UBM1 199 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 LIPT1Q9Y234 373 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PLEKHM1Q9Y4G2 1056 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 V9GYQ6 96 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 HEG1Q9ULI3 1381 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 A0A1B0GTH6 734 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 A0A1W2PRG0 241 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 AGAP5A6NIR3 686 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 PYCARD-AS1I3L0S3 204 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 DCLK1O15075 740 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 PAPSS1O43252 624 aaPredicted RBP3.05□□□□□ -1.92
CHD9-216ENST00000565803 SSX5O60225 188 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 NOBOXO60393 691 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 CDH16O75309 829 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 CDC123O75794 336 aaPredicted RBP3.05□□□□□ -1.92
CHD9-216ENST00000565803 TMEM63AO94886 807 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 ZBTB11O95625 1053 aaPredicted RBP3.05□□□□□ -1.92
CHD9-216ENST00000565803 NTSR2O95665 410 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 CALCAP01258 141 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 APOA1P02647 267 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 KLKB1P03952 638 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 CYP3A4P08684 503 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 PRPS2P11908 318 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 AREGP15514 252 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 TGM1P22735 817 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 U2AF2P26368 475 aaKnown RBP eCLIP3.05□□□□□ -1.924e-6■■■□□ 14.6
CHD9-216ENST00000565803 CD6P30203 668 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 SUCLG1P53597 346 aaKnown RBP3.05□□□□□ -1.92
CHD9-216ENST00000565803 MRPS25P82663 173 aaKnown RBP3.05□□□□□ -1.92
CHD9-216ENST00000565803 SHC2P98077 582 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 BDH1Q02338 343 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 TBL3Q12788 808 aaKnown RBP3.05□□□□□ -1.92
CHD9-216ENST00000565803 LCP2Q13094 533 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 CTBP1Q13363 440 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 IL18Q14116 193 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 CA9Q16790 459 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 FAM83EQ2M2I3 478 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 SLC35F1Q5T1Q4 408 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 ATF7IP2Q5U623 682 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 DCAF12L1Q5VU92 463 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 OR7E24Q6IFN5 339 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 ESRP1Q6NXG1 681 aaKnown RBP3.05□□□□□ -1.92
CHD9-216ENST00000565803 CRTC3Q6UUV7 619 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 KCTD8Q6ZWB6 473 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 COPS6Q7L5N1 327 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 ZNF551Q7Z340 670 aaPredicted RBP3.05□□□□□ -1.92
CHD9-216ENST00000565803 AACSQ86V21 672 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 CABP7Q86V35 215 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 CYP4Z1Q86W10 505 aa3.05□□□□□ -1.92
CHD9-216ENST00000565803 LRRC6Q86X45 466 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms