RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 FSD1LQ9BXM9 530 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 B3GNT4Q9C0J1 378 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 GBA3Q9H227 469 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 STN1Q9H668 368 aaKnown RBP9.89□□□□□ -0.83
CMTM3-209ENST00000565003 IL26Q9NPH9 171 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 OCIAD1Q9NX40 245 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 IL17CQ9P0M4 197 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 RSPH14Q9UHP6 348 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 DNAJC16Q9Y2G8 782 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 PCDHGA3Q9Y5H0 932 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 PCDHA3Q9Y5H8 950 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 B3GALT1Q9Y5Z6 326 aa9.89□□□□□ -0.83
CMTM3-209ENST00000565003 MACROD2A1Z1Q3 448 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 GRID2IPA4D2P6 1211 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 LILRA5A6NI73 299 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 EFCAB7A8K855 629 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 A8MU76 341 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 B4E171 279 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 H7C0C1 242 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 GAPDHSO14556 408 aaPredicted RBP9.88□□□□□ -0.83
CMTM3-209ENST00000565003 KMOO15229 486 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 CDK14O94921 469 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 AGTP01019 485 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 SLC2A4P14672 509 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 BRAFP15056 766 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 ZNF7P17097 686 aaPredicted RBP9.88□□□□□ -0.83
CMTM3-209ENST00000565003 HLA-DPA1P20036 260 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 CTNNA2P26232 953 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 RPL10P27635 214 aaKnown RBP9.88□□□□□ -0.83
CMTM3-209ENST00000565003 CSTF2P33240 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
CMTM3-209ENST00000565003 SPAM1P38567 509 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 SLC19A1P41440 591 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 TSPAN7P41732 249 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 MAPK9P45984 424 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 ATP5OP48047 213 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 PPM1FP49593 454 aaPredicted RBP9.88□□□□□ -0.83
CMTM3-209ENST00000565003 COPS2P61201 443 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 C19orf57Q0VDD7 668 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 OLIG2Q13516 323 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 PTPRCAPQ14761 206 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 CHRNA6Q15825 494 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 SNAP47Q5SQN1 464 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 MANEAQ5SRI9 462 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 TMEM164Q5U3C3 297 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 ANKS6Q68DC2 871 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 C11orf96Q7Z7L8 435 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 GAS2L3Q86XJ1 694 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 TRAPPC5Q8IUR0 188 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 TMTC1Q8IUR5 882 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 BMPERQ8N8U9 685 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 LRRC57Q8N9N7 239 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 ACTL9Q8TC94 416 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 JPH3Q8WXH2 748 aaPredicted RBP9.88□□□□□ -0.83
CMTM3-209ENST00000565003 NCSTNQ92542 709 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 SH3KBP1Q96B97 665 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 WBP1Q96G27 269 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 TAAR9Q96RI9 348 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 TIMM29Q9BSF4 260 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 FICDQ9BVA6 458 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 DDA1Q9BW61 102 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 OSBPL8Q9BZF1 889 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 TRABDQ9H4I3 376 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 OGFRQ9NZT2 677 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 HACD3Q9P035 362 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 ZNF624Q9P2J8 865 aaPredicted RBP9.88□□□□□ -0.83
CMTM3-209ENST00000565003 KLHL3Q9UH77 587 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 TRHDEQ9UKU6 1024 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
CMTM3-209ENST00000565003 ATMQ13315 3056 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 GLYATL1P3A0A0U1RQE8 302 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 A0A0U1RQJ8 604 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 CCDC66A2RUB6 948 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 OR5K4A6NMS3 321 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 PDZK1P1A8MUH7 402 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 BTNL10A8MVZ5 291 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 STMND1H3BQB6 276 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 UGT1A9O60656 530 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 IPO7O95373 1038 aaKnown RBP9.87□□□□□ -0.83
CMTM3-209ENST00000565003 PYGMP11217 842 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 XRCC1P18887 633 aaPredicted RBP9.87□□□□□ -0.83
CMTM3-209ENST00000565003 UGT1A6P19224 532 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 UGT1A1P22309 533 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 UGT1A4P22310 534 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 PSMB4P28070 264 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 PTPN7P35236 360 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 UGT1A3P35503 534 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 TNNT3P45378 269 aaPredicted RBP9.87□□□□□ -0.83
CMTM3-209ENST00000565003 VAV2P52735 878 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 DRG2P55039 364 aaKnown RBP9.87□□□□□ -0.83
CMTM3-209ENST00000565003 NAP1L1P55209 391 aaKnown RBP9.87□□□□□ -0.83
CMTM3-209ENST00000565003 GFERP55789 205 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 EIF3EP60228 445 aaKnown RBP9.87□□□□□ -0.83
CMTM3-209ENST00000565003 TMEM115Q12893 351 aaPredicted RBP9.87□□□□□ -0.83
CMTM3-209ENST00000565003 CCDC181Q5TID7 509 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 ZDHHC20Q5W0Z9 365 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 TMEM26Q6ZUK4 368 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 ARHGAP22Q7Z5H3 698 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 TMEM139Q8IV31 216 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 RASGEF1AQ8N9B8 481 aa9.87□□□□□ -0.83
CMTM3-209ENST00000565003 AVL9Q8NBF6 648 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms