RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 RGRP47804 291 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ARHGDIBP52566 201 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 MRPS5P82675 430 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC6A3Q01959 620 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 NOGQ13253 232 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 UPP1Q16831 310 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CDCA2Q69YH5 1023 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 UNC5AQ6ZN44 842 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RASSF3Q86WH2 238 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 GPR150Q8NGU9 434 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RFKQ969G6 155 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TMEM74Q96NL1 305 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PITHD1Q9GZP4 211 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 ST6GALNAC4Q9H4F1 302 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PAPOLBQ9NRJ5 636 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 H2AFY2Q9P0M6 372 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 WHRNQ9P202 907 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 FBXL21Q9UKT6 434 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC39A10Q9ULF5 831 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 KLHL20Q9Y2M5 609 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 GSTK1Q9Y2Q3 226 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 COQ6Q9Y2Z9 468 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SPIN1Q9Y657 262 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 PRRC2CQ9Y520 2896 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 A0A1W2PRU2 124 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 DPYSL4O14531 572 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 APOC1P02654 83 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 NTRK1P04629 796 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 HTR1BP28222 390 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ERP29P30040 261 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 RRM2P31350 389 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 EPHB1P54762 984 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 FCGRTP55899 365 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 GMFBP60983 142 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PRAMEP78395 509 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC25A3Q00325 362 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TFF2Q03403 129 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CDK18Q07002 472 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RALGDSQ12967 914 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 MRPL28Q13084 256 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 CYLC2Q14093 348 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 RNASEH2BQ5TBB1 312 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 LRRC38Q5VT99 294 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 KYAT3Q6YP21 454 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 CEP97Q8IW35 865 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 GPALPP1Q8IXQ4 340 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 Q8N402 240 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 BCO2Q9BYV7 579 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PITPNM3Q9BZ71 974 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CD93Q9NPY3 652 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 FKBP14Q9NWM8 211 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC24A2Q9UI40 661 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 MBD1Q9UIS9 605 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 BTRCQ9Y297 605 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 STON1Q9Y6Q2 735 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 MIA3Q5JRA6 1907 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 HMX2A2RU54 273 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CHP2O43745 196 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ZNF12P17014 697 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PTPN7P35236 360 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 KRT6CP48668 564 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TEAD4Q15561 434 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TIGD2Q4W5G0 525 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ARID3BQ8IVW6 561 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 ASB13Q8WXK3 278 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TOP1MTQ969P6 601 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ART5Q96L15 291 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SYT15Q9BQS2 421 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 EPN3Q9H201 632 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RERGLQ9H628 205 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SCN3BQ9NY72 215 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RAB23Q9ULC3 237 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CFL2Q9Y281 166 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RPS6KL1Q9Y6S9 549 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 MYO18AQ92614 2054 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 FPGTO14772 594 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RAD51BO15315 384 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 INSIG1O15503 277 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 AKAP8O43823 692 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 LRIG2O94898 1065 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SEC24AO95486 1093 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 KRT6BP04259 564 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ASLP04424 464 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 GM2AP17900 193 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CYP2A7P20853 494 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC6A4P31645 630 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 HPCAL1P37235 193 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 MRPS6P82932 125 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 INO80DQ53TQ3 878 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 C1QTNF12Q5T7M4 302 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 UNC93AQ86WB7 457 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CLDN19Q8N6F1 224 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 NAT8LQ8N9F0 302 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 FAM81AQ8TBF8 368 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 KLK6Q92876 244 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SMARCD1Q96GM5 515 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 NSUN5Q96P11 429 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC30A3Q99726 388 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 C7orf50Q9BRJ6 194 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 ATG2BQ96BY7 2078 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms