RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KIR2DS3K7RE56 304 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 ZZEF1O43149 2961 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 PRAMEF1O95521 474 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 IFNB1P01574 187 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 VCLP18206 1134 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 EIF2S3P41091 472 aaKnown RBP18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 ERVPABLB-1P60509 514 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 HHEXQ03014 270 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 MSLNQ13421 630 aaPredicted RBP18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 KIR2DS5Q14953 304 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 OASLQ15646 514 aaKnown RBP18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 CLPPQ16740 277 aaPredicted RBP18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 RAB11FIP2Q7L804 512 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 FBXO39Q8N4B4 442 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 SNIP1Q8TAD8 396 aaKnown RBP18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 MAIP1Q8WWC4 291 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 SH3KBP1Q96B97 665 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 RTP4Q96DX8 246 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 AHCYL2Q96HN2 611 aaKnown RBP18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 SLC46A1Q96NT5 459 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 TIMM29Q9BSF4 260 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 ASB8Q9H765 288 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 RDH14Q9HBH5 336 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 SARS2Q9NP81 518 aaKnown RBP18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 PRDM8Q9NQV8 689 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 SLC23A2Q9UGH3 650 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 FKBPLQ9UIM3 349 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 KCTD3Q9Y597 815 aa18.09■□□□□ 0.49
SYNGR3-204ENST00000564642 A0A087WV48 116 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 A0A1W2PNU3 283 aaPredicted RBP18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 GAPDHSO14556 408 aaPredicted RBP18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 GPR39O43194 453 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 SRP72O76094 671 aaKnown RBP18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 TNFSF15O95150 251 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 TPH1P17752 444 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 MSH3P20585 1137 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 CD1CP29017 333 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 AKT1P31749 480 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 HADHAP40939 763 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 LMAN1P49257 510 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 TMPRSS15P98073 1019 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 ZFP36L1Q07352 338 aaKnown RBP18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 PHF19Q5T6S3 580 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 C19orf48Q6RUI8 117 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 IGF2-ASQ6U949 168 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 LINC00523Q86TU6 105 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 ZNF547Q8IVP9 402 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 AVL9Q8NBF6 648 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 DDHD1Q8NEL9 900 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 OR13C4Q8NGS5 318 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 ZMYND15Q9H091 742 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 URB1O60287 2271 aaKnown RBP18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 ADAMTS20P59510 1910 aa18.08■□□□□ 0.48
SYNGR3-204ENST00000564642 FREM2Q5SZK8 3169 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 IGHV1OR21-1A0A087WYE8 117 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 A6NCN8 305 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 PDZK1P1A8MUH7 402 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 PLD2O14939 933 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 AP2A1O95782 977 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 IDSP22304 550 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 FDFT1P37268 417 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 PCBP4P57723 403 aaKnown RBP18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 GPLD1P80108 840 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 NFATC2Q13469 925 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 CCNG2Q16589 344 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 GPRC6AQ5T6X5 926 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 NKAIN2Q5VXU1 208 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 ZNF761Q86XN6 746 aaPredicted RBP18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 CCDC89Q8N998 374 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 RASGEF1AQ8N9B8 481 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 OR10G6Q8NH81 332 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 TMEM159Q96B96 161 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 PRR11Q96HE9 360 aaPredicted RBP18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 CMKLR1Q99788 373 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 DPYSL5Q9BPU6 564 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 C19orf43Q9BQ61 176 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 TLR10Q9BXR5 811 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 SEMA6CQ9H3T2 930 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 ETNK1Q9HBU6 452 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 ASCL3Q9NQ33 180 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 SMOXQ9NWM0 555 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 AKAP7Q9P0M2 348 aaPredicted RBP18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 CPNE7Q9UBL6 633 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 CRLS1Q9UJA2 301 aa18.07■□□□□ 0.48
SYNGR3-204ENST00000564642 OR2AG2A6NM03 316 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 ERI2A8K979 691 aaKnown RBP18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 E7EVH7 732 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 AGRPO00253 132 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 LDB2O43679 373 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 CEP104O60308 925 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 KCNJ13O60928 360 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 GAS8O95995 478 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 FGGP02679 453 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 JMJD7P0C870 316 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 MLLT3P42568 568 aaPredicted RBP18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 ABCG1P45844 678 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 ZNF140P52738 457 aaPredicted RBP18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 SQSTM1Q13501 440 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms