RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 SETD3Q86TU7 594 aaPredicted RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 C11orf74Q86VG3 221 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 GLB1L2Q8IW92 636 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 MFSD6LQ8IWD5 586 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 BBS7Q8IWZ6 715 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 CCDC13Q8IYE1 715 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 CFAP52Q8N1V2 620 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 UMODL1-AS1Q8N2C9 162 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 NXPE1Q8N323 547 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 BBS5Q8N3I7 341 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 AFAP1L2Q8N4X5 818 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 ATPAF2Q8N5M1 289 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 ALLCQ8N6M5 410 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 ZNF610Q8N9Z0 462 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 TDRD5Q8NAT2 981 aaKnown RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 NOA1Q8NC60 698 aaKnown RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 HJURPQ8NCD3 748 aaPredicted RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 PIK3C3Q8NEB9 887 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 OR52N2Q8NGI0 321 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 SLC35B2Q8TB61 432 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 BPIFB1Q8TDL5 484 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 CHTF18Q8WVB6 975 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 OSCP1Q8WVF1 389 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 GAB3Q8WWW8 586 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 HTR3CQ8WXA8 447 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 ATG4AQ8WYN0 398 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.68□□□□□ -1.66
CDR2-203ENST00000563573 FGF13Q92913 245 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 USP13Q92995 863 aaPredicted RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 IGSF8Q969P0 613 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 ELSPBP1Q96BH3 223 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 HDAC11Q96DB2 347 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 MYEOVQ96EZ4 313 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 TSGA13Q96PP4 275 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 PPP1R2P1Q96PQ5 205 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 XPO6Q96QU8 1125 aaKnown RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 VAT1Q99536 393 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 FAM118BQ9BPY3 351 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 TMEM121Q9BTD3 319 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 NDC1Q9BTX1 674 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 FAM126AQ9BYI3 521 aaPredicted RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 SLC39A8Q9C0K1 460 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 TSPYL1Q9H0U9 437 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 S1PR5Q9H228 398 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 KCNH6Q9H252 994 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 CAAP1Q9H8G2 361 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 TRPV4Q9HBA0 871 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 ZFP14Q9HCL3 533 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 SPHK2Q9NRA0 654 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 ARGLU1Q9NWB6 273 aaPredicted RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 DUS2Q9NX74 493 aaKnown RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 GOLGA6AQ9NYA3 693 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 SEPT10Q9P0V9 454 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 PAK5Q9P286 719 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.68□□□□□ -1.66
CDR2-203ENST00000563573 ASIC3Q9UHC3 531 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 XPO7Q9UIA9 1087 aaKnown RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 CD207Q9UJ71 328 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 ANAPC5Q9UJX4 755 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 TRHDEQ9UKU6 1024 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 CDH7Q9ULB5 785 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 FAM50BQ9Y247 325 aa4.68□□□□□ -1.66
CDR2-203ENST00000563573 R3HDM2Q9Y2K5 976 aaKnown RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 V9GYY5 206 aaPredicted RBP4.68□□□□□ -1.66
CDR2-203ENST00000563573 NYNRINQ9P2P1 1898 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 KIF26AQ9ULI4 1882 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 C5orf60A6NFR6 353 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 ZSCAN5CA6NGD5 496 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 HEPACAM2A8MVW5 462 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 PRR5-ARHGAP8B1AHC4 643 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 RASA4BC9J798 803 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 E7EVH7 732 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 I6L893 689 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 PSMD3O43242 534 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 CTIFO43310 598 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 RASA4O43374 803 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 KDELR3O43731 214 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 MFSD11O43934 449 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 GCATO75600 419 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 LUC7L3O95232 432 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 NFATC1O95644 943 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 LMNAP02545 664 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 LAMP2P13473 410 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 FOSL2P15408 326 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 PSMC3P17980 439 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 SLC6A4P31645 630 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 FDFT1P37268 417 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 NNMTP40261 264 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 GARSP41250 739 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 VIPR2P41587 438 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 TNNT3P45378 269 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 GEMIN4P57678 1058 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 ZXDBP98169 803 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 MEF2AQ02078 507 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 GNA12Q03113 381 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 COL10A1Q03692 680 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 IL10RBQ08334 325 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 SLC20A2Q08357 652 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 PPIDQ08752 370 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 ITKQ08881 620 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms