RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 C11orf96Q7Z7L8 435 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 PIM3Q86V86 326 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 TRIM58Q8NG06 486 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 GDAP1Q8TB36 358 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 ZNF398Q8TD17 642 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 HNRNPLLQ8WVV9 542 aaKnown RBP15.26■□□□□ 0.03
CCDC113-203ENST00000561517 LRRC40Q9H9A6 602 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 GRPEL1Q9HAV7 217 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 EPB41L5Q9HCM4 733 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 THSD1Q9NS62 852 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 PPP2R2CQ9Y2T4 447 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 KCTD3Q9Y597 815 aa15.26■□□□□ 0.03
CCDC113-203ENST00000561517 PLD2O14939 933 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 PSMD3O43242 534 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 SNX2O60749 519 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 PRAMEF1O95521 474 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 AP2A1O95782 977 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 RBMS1P29558 406 aaKnown RBP15.25■□□□□ 0.03
CCDC113-203ENST00000561517 ZNF140P52738 457 aaPredicted RBP15.25■□□□□ 0.03
CCDC113-203ENST00000561517 PCBP4P57723 403 aaKnown RBP15.25■□□□□ 0.03
CCDC113-203ENST00000561517 GPLD1P80108 840 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 XIAPP98170 497 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 HHEXQ03014 270 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 GTF2H3Q13889 308 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 SIX1Q15475 284 aaPredicted RBP15.25■□□□□ 0.03
CCDC113-203ENST00000561517 INSCQ1MX18 579 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 AMZ1Q400G9 498 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 MAP9Q49MG5 647 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 GPRC6AQ5T6X5 926 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 C19orf48Q6RUI8 117 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 ZNF574Q6ZN55 896 aaPredicted RBP15.25■□□□□ 0.03
CCDC113-203ENST00000561517 USP53Q70EK8 1073 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 CLEC14AQ86T13 490 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 SLC9B2Q86UD5 537 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 FBXO39Q8N4B4 442 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 AVL9Q8NBF6 648 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 TMEM159Q96B96 161 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 DCBLD2Q96PD2 775 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 NUDT22Q9BRQ3 303 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 TLR10Q9BXR5 811 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 ZCCHC2Q9C0B9 1178 aaKnown RBP15.25■□□□□ 0.03
CCDC113-203ENST00000561517 SEMA6CQ9H3T2 930 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 RDH14Q9HBH5 336 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 PRDM8Q9NQV8 689 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 KCNK4Q9NYG8 393 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 FKBPLQ9UIM3 349 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 ITPR1Q14643 2758 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 CACNA1GO43497 2377 aa15.25■□□□□ 0.03
CCDC113-203ENST00000561517 AGAP14A8MT82 685 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 RRP8O43159 456 aaKnown RBP15.24■□□□□ 0.03
CCDC113-203ENST00000561517 LDB2O43679 373 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 KCNJ13O60928 360 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 SRP72O76094 671 aaKnown RBP15.24■□□□□ 0.03
CCDC113-203ENST00000561517 TNFSF15O95150 251 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 ITGA2BP08514 1039 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 XRCC1P18887 633 aaPredicted RBP15.24■□□□□ 0.03
CCDC113-203ENST00000561517 CTSCP53634 463 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 UBE2IP63279 158 aaKnown RBP15.24■□□□□ 0.03
CCDC113-203ENST00000561517 CFHR1Q03591 330 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 COL28A1Q2UY09 1125 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 PLA2G4EQ3MJ16 856 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 ABRAXAS1Q6UWZ7 409 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 WASH2PQ6VEQ5 465 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 LRRC69Q6ZNQ3 347 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 TRAPPC5Q8IUR0 188 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 RASGEF1AQ8N9B8 481 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 ZNF248Q8NDW4 579 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 OR13C4Q8NGS5 318 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 C1orf54Q8WWF1 131 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 SH3KBP1Q96B97 665 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 TTC25Q96NG3 672 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 SLC38A3Q99624 504 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 DPYSL5Q9BPU6 564 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 OSGEPL1Q9H4B0 414 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 STN1Q9H668 368 aaKnown RBP15.24■□□□□ 0.03
CCDC113-203ENST00000561517 WASH6PQ9NQA3 447 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 SCHIP1Q9P0W5 487 aaPredicted RBP15.24■□□□□ 0.03
CCDC113-203ENST00000561517 CPNE7Q9UBL6 633 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 LHX6Q9UPM6 363 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 DNMT3AQ9Y6K1 912 aaPredicted RBP15.24■□□□□ 0.03
CCDC113-203ENST00000561517 LAMA5O15230 3695 aa15.24■□□□□ 0.03
CCDC113-203ENST00000561517 IGHV5-10-1A0A0J9YXX1 117 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 ERI2A8K979 691 aaKnown RBP15.23■□□□□ 0.03
CCDC113-203ENST00000561517 HOXB3P14651 431 aaPredicted RBP15.23■□□□□ 0.03
CCDC113-203ENST00000561517 ITPKBP27987 946 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 CSF2RBP32927 897 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 FDFT1P37268 417 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 HADHAP40939 763 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 ABCG1P45844 678 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 LIMK2P53671 638 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 EPHA4P54764 986 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 DMPKQ09013 629 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 NFATC2Q13469 925 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 TRA2AQ13595 282 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCDC113-203ENST00000561517 CCNG2Q16589 344 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 AGAP9Q5VTM2 703 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 NKAIN2Q5VXU1 208 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 DRICH1Q6PGQ1 229 aaPredicted RBP15.23■□□□□ 0.03
CCDC113-203ENST00000561517 FOXR1Q6PIV2 292 aa15.23■□□□□ 0.03
CCDC113-203ENST00000561517 ZNF761Q86XN6 746 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms