RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 KCNN4O15554 427 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 AGTP01019 485 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 PRB1P04280 392 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 PYGMP11217 842 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 SLC2A4P14672 509 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 GEMP55040 296 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 VAC14Q08AM6 782 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 SRSF6Q13247 344 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 PTPRCAPQ14761 206 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 SEPT7Q16181 437 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 SLC9B2Q86UD5 537 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 ZFAND4Q86XD8 727 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 TRAPPC5Q8IUR0 188 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 GDAP1Q8TB36 358 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 APOL2Q9BQE5 337 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 IL26Q9NPH9 171 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 AKAP7Q9P0M2 348 aaPredicted RBP16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 SCHIP1Q9P0W5 487 aaPredicted RBP16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 CPNE7Q9UBL6 633 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 ACSL6Q9UKU0 697 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 EFR3BQ9Y2G0 817 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 KIR2DS5A0A0G2JLQ3 304 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 A0A0G2JNG1 304 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 EIF4E1BA6NMX2 242 aaKnown RBP16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 KIR2DS3K7RE56 304 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 KMOO15229 486 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 VEGFDO43915 354 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 CDK14O94921 469 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 FTCDO95954 541 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 LIPCP11150 499 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 ZNF7P17097 686 aaPredicted RBP16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 CA5AP35218 305 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 CLCNKAP51800 687 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 SQSTM1Q13501 440 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 KIR2DS5Q14953 304 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 CHRNA6Q15825 494 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 ANKRD20A2Q5SQ80 823 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 SNAP47Q5SQN1 464 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 ANKRD20A1Q5TYW2 823 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 ANKRD20A3Q5VUR7 823 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 DARS2Q6PI48 645 aaKnown RBP16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 PEX26Q7Z412 305 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 CCDC110Q8TBZ0 833 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 FERMT1Q9BQL6 677 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 TIMM29Q9BSF4 260 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 TBC1D10AQ9BXI6 508 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 AMFRQ9UKV5 643 aa16.95■□□□□ 0.3
CDC42BPB-208ENST00000561271 SPTBP11277 2137 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 GLYATL1P3A0A0U1RQE8 302 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 PDZK1P1A8MUH7 402 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 GAPDHSO14556 408 aaPredicted RBP16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 ANXA9O76027 345 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 STK10O94804 968 aaKnown RBP16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 TJP3O95049 919 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 FGF3P11487 239 aaPredicted RBP16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 CDC25BP30305 580 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 CETN2P41208 172 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 UBE2IP63279 158 aaKnown RBP16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 TRA2AQ13595 282 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 GTF2H3Q13889 308 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 TMEM71Q6P5X7 295 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 PCSK4Q6UW60 755 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 CCDC81Q6ZN84 652 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 VASH2Q86V25 355 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 SLC39A7Q92504 469 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 SPATA13Q96N96 652 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 CCNL2Q96S94 520 aaPredicted RBP16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 DPYSL5Q9BPU6 564 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 PKP3Q9Y446 797 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 ARL5AQ9Y689 179 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 CAPN6Q9Y6Q1 641 aa16.94■□□□□ 0.3
CDC42BPB-208ENST00000561271 PRR19A6NJB7 356 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 OR5K4A6NMS3 321 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 A8MU76 341 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 K7ENP7 123 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 UGT1A9O60656 530 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 PTMAP06454 111 aaKnown RBP16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 UGT1A6P19224 532 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 UGT1A1P22309 533 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 UGT1A4P22310 534 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 RPL10P27635 214 aaKnown RBP16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 CSTF2P33240 577 aaKnown RBP eCLIP16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 ADRA1AP35348 466 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 UGT1A3P35503 534 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 ARSDP51689 593 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 CTSCP53634 463 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 EPHA4P54764 986 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 DRG2P55039 364 aaKnown RBP16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 KIF5AQ12840 1032 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 TMEM115Q12893 351 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 KIAA1614Q5VZ46 1190 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 ZDHHC20Q5W0Z9 365 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 INO80CQ6PI98 192 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 C11orf96Q7Z7L8 435 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 FAM129CQ86XR2 697 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 TRIM48Q8IWZ4 208 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 AGBL5Q8NDL9 886 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 DDHD1Q8NEL9 900 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 NCSTNQ92542 709 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 ART4Q93070 314 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms