RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 VEGFDO43915 354 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 MT-CO3P00414 261 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 CAPNS1P04632 268 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 GP1BAP07359 652 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 ZNF7P17097 686 aaPredicted RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 TCP1P17987 556 aaKnown RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 MSNP26038 577 aaKnown RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 MAGEA6P43360 314 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 DUSP3P51452 185 aaPredicted RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 PDX1P52945 283 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 SESN2P58004 480 aaPredicted RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 TSTD2Q5T7W7 516 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 ZDHHC20Q5W0Z9 365 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 TMEM220Q6QAJ8 160 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 FAM83HQ6ZRV2 1179 aaPredicted RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 LRRTM4Q86VH4 590 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 ZNF761Q86XN6 746 aaPredicted RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 MPP5Q8N3R9 675 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 Q8N9G6 341 aaPredicted RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 MAPK15Q8TD08 544 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 SLC37A2Q8TED4 501 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 STYXQ8WUJ0 223 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 SGF29Q96ES7 293 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 TRIM56Q9BRZ2 755 aaKnown RBP13.7□□□□□ -0.22
TPM1-230ENST00000561266 CHRAC1Q9NRG0 131 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 LRIT1Q9P2V4 623 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 DNAJC16Q9Y2G8 782 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 PCDHB1Q9Y5F3 818 aa13.7□□□□□ -0.22
TPM1-230ENST00000561266 PMS2P1A4D2B8 440 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 NTN3O00634 580 aaPredicted RBP13.69□□□□□ -0.22
TPM1-230ENST00000561266 KMOO15229 486 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 SNX2O60749 519 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 BRAFP15056 766 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 TPSB2P20231 275 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 MGAT1P26572 445 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 FOXN2P32314 431 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 OR1D5P58170 312 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 E2F1Q01094 437 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 ITGA9Q13797 1035 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 SEMA3AQ14563 771 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 TPSAB1Q15661 275 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 LDLRAP1Q5SW96 308 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 CES3Q6UWW8 571 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 SNX20Q7Z614 316 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 CAND1Q86VP6 1230 aaKnown RBP13.69□□□□□ -0.22
TPM1-230ENST00000561266 TMPRSS12Q86WS5 348 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 NXPE1Q8N323 547 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 LILRA3Q8N6C8 439 aaPredicted RBP13.69□□□□□ -0.22
TPM1-230ENST00000561266 DCBLD1Q8N8Z6 715 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 GLMNQ92990 594 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 HDAC10Q969S8 669 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 SYBUQ9NX95 663 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 ATXN7L1Q9ULK2 861 aaPredicted RBP13.69□□□□□ -0.22
TPM1-230ENST00000561266 WDR37Q9Y2I8 494 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 TCAF1Q9Y4C2 921 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 PRSS21Q9Y6M0 314 aa13.69□□□□□ -0.22
TPM1-230ENST00000561266 FREM2Q5SZK8 3169 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 CTAGE9A4FU28 777 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 TRABD2BA6NFA1 517 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 POP7O75817 140 aaKnown RBP13.68□□□□□ -0.22
TPM1-230ENST00000561266 JUPP14923 745 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 GLB1P16278 677 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 ADRA1DP25100 572 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 IVDP26440 423 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 NMBRP28336 390 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 HADHAP40939 763 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 RPIAP49247 311 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 FNTAP49354 379 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 CLCNKAP51800 687 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
TPM1-230ENST00000561266 PDE1BQ01064 536 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 CFHR1Q03591 330 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 ACVR1Q04771 509 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 LRP8Q14114 963 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 DBN1Q16643 649 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 ZRANB3Q5FWF4 1079 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 FNBP1LQ5T0N5 605 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 IYDQ6PHW0 289 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 C4orf22Q6V702 233 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 SYT10Q6XYQ8 523 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 ZNF438Q7Z4V0 828 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 B3GNT8Q7Z7M8 397 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 SERPINA9Q86WD7 417 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 TRAPPC5Q8IUR0 188 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 KLHL7Q8IXQ5 586 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 GALNT15Q8N3T1 639 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 SFRP1Q8N474 314 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
TPM1-230ENST00000561266 C19orf43Q9BQ61 176 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 OSGEPL1Q9H4B0 414 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 NCKIPSDQ9NZQ3 722 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 ZNF624Q9P2J8 865 aaPredicted RBP13.68□□□□□ -0.22
TPM1-230ENST00000561266 CRLS1Q9UJA2 301 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 CLCA2Q9UQC9 943 aa13.68□□□□□ -0.22
TPM1-230ENST00000561266 IGLV3-16A0A075B6K0 115 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 HEATR9A2RTY3 570 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 GPR89AB7ZAQ6 455 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms