RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ITGB6P18564 788 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 SLC19A1P41440 591 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 HADHBP55084 474 aaKnown RBP15.98■□□□□ 0.15
SNX1-213ENST00000561026 WNT3AP56704 352 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 ADCY2Q08462 1091 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 INSCQ1MX18 579 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 PLA2G4EQ3MJ16 856 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 KHDC1Q4VXA5 237 aaKnown RBP15.98■□□□□ 0.15
SNX1-213ENST00000561026 TFDP3Q5H9I0 405 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 KAZNQ674X7 775 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 TMEM26Q6ZUK4 368 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 P3H4Q92791 437 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 VPS35Q96QK1 796 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 CTRCQ99895 268 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 ZPBPQ9BS86 351 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 TIMM29Q9BSF4 260 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 TRABDQ9H4I3 376 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 BPIFA1Q9NP55 256 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 ZNF624Q9P2J8 865 aaPredicted RBP15.98■□□□□ 0.15
SNX1-213ENST00000561026 KLHL3Q9UH77 587 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 DNAJC16Q9Y2G8 782 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 SLC28A2O43868 658 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 ZRANB2O95218 330 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNX1-213ENST00000561026 VIPP01282 170 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 MAGEA1P43355 309 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 ATP13A5Q4VNC0 1218 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 KDELC1Q6UW63 502 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 ABRAXAS1Q6UWZ7 409 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 CEACAM20Q6UY09 585 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 ZC3H18Q86VM9 953 aaKnown RBP15.97■□□□□ 0.15
SNX1-213ENST00000561026 VAT1Q99536 393 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 GOLPH3Q9H4A6 298 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 IL26Q9NPH9 171 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 OGFRQ9NZT2 677 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 SLC30A1Q9Y6M5 507 aa15.97■□□□□ 0.15
SNX1-213ENST00000561026 MN1Q10571 1320 aaPredicted RBP15.96■□□□□ 0.15
SNX1-213ENST00000561026 PDZK1P1A8MUH7 402 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 C9P02748 559 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 ANKRD34CP0C6C1 535 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 BRAFP15056 766 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 NFKB1P19838 968 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 MAP4P27816 1152 aaKnown RBP15.96■□□□□ 0.15
SNX1-213ENST00000561026 TMEM115Q12893 351 aaPredicted RBP15.96■□□□□ 0.15
SNX1-213ENST00000561026 CLCA4Q14CN2 919 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 NOMO1Q15155 1222 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 SEPT7Q16181 437 aaKnown RBP15.96■□□□□ 0.15
SNX1-213ENST00000561026 SIRPB2Q5JXA9 342 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 ZDHHC20Q5W0Z9 365 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 WASH2PQ6VEQ5 465 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 PID1Q7Z2X4 250 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 C11orf96Q7Z7L8 435 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 TRIM48Q8IWZ4 208 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 KATNAL2Q8IYT4 538 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 RCOR2Q8IZ40 523 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 NLGN4XQ8N0W4 816 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 TTC30BQ8N4P2 665 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 NLGN4YQ8NFZ3 816 aaPredicted RBP15.96■□□□□ 0.15
SNX1-213ENST00000561026 DTX3LQ8TDB6 740 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 BRSK1Q8TDC3 778 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 C9orf72Q96LT7 481 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 FCRL5Q96RD9 977 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 FAM117AQ9C073 453 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 APMAPQ9HDC9 416 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 WASH6PQ9NQA3 447 aa15.96■□□□□ 0.15
SNX1-213ENST00000561026 KLHL8Q9P2G9 620 aaPredicted RBP15.96■□□□□ 0.15
SNX1-213ENST00000561026 hCG_1818297A0A087WSY0 165 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 POLR1CO15160 346 aaPredicted RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 CAPN5O15484 640 aaPredicted RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 UBXN7O94888 489 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 TYRP1P17643 537 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 IDSP22304 550 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 RPL10P27635 214 aaKnown RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 CHRNA4P43681 627 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 TNNT3P45378 269 aaPredicted RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 GFERP55789 205 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 AGAP9Q5VTM2 703 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 BORAQ6PGQ7 559 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 TIPARPQ7Z3E1 657 aaKnown RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 PRICKLE2Q7Z3G6 844 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 ZNF567Q8N184 647 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 SLC25A41Q8N5S1 370 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 TC2NQ8N9U0 490 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 GDAP1Q8TB36 358 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 OXNAD1Q96HP4 312 aaPredicted RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 SLC45A3Q96JT2 553 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 MRGPRX2Q96LB1 330 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 SLC40A1Q9NP59 571 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 POT1Q9NUX5 634 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 GEMIN8Q9NWZ8 242 aaKnown RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 SIDT1Q9NXL6 827 aaKnown RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNX1-213ENST00000561026 HACD3Q9P035 362 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 IL17CQ9P0M4 197 aa15.95■□□□□ 0.14
SNX1-213ENST00000561026 TMEM184BQ9Y519 407 aaPredicted RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 HEMK1Q9Y5R4 338 aaPredicted RBP15.95■□□□□ 0.14
SNX1-213ENST00000561026 BSNQ9UPA5 3926 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 OR52A4PA6NMU1 304 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 TOX3O15405 576 aaPredicted RBP15.94■□□□□ 0.14
SNX1-213ENST00000561026 STK17BO94768 372 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 LCA5LO95447 670 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms