RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 U3KQV3 271 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 UTRNP46939 3433 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 TTC34A8MYJ7 566 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 SNX2O60749 519 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 GUCY1B2O75343 617 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 TXNP10599 105 aaKnown RBP16.35■□□□□ 0.21
TPM1-228ENST00000560975 PTPN2P17706 415 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 EDNRBP24530 442 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 ZFP36L2P47974 494 aaKnown RBP16.35■□□□□ 0.21
TPM1-228ENST00000560975 GABARAPL2P60520 117 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 CAMK2BQ13554 666 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 OR4D1Q15615 310 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 TAS2R42Q7RTR8 314 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 ATP6V0D2Q8N8Y2 350 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 DCBLD1Q8N8Z6 715 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 TRIB2Q92519 343 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 COLEC11Q9BWP8 271 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 LRRC3Q9BY71 257 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 NFKBIZQ9BYH8 718 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 MARCH4Q9P2E8 410 aaPredicted RBP16.35■□□□□ 0.21
TPM1-228ENST00000560975 LOC100130705A0A1B0GUX0 176 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 EEDO75530 441 aaKnown RBP16.35■□□□□ 0.21
TPM1-228ENST00000560975 KCNK2O95069 426 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 HLA-DQB2P05538 268 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 IL12AP29459 219 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 PRDX3P30048 256 aaKnown RBP16.35■□□□□ 0.21
TPM1-228ENST00000560975 IL1RL1Q01638 556 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 YWHAHQ04917 246 aaPredicted RBP16.35■□□□□ 0.21
TPM1-228ENST00000560975 NKG7Q16617 165 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 KYAT1Q16773 422 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 INTS6LQ5JSJ4 861 aaKnown RBP16.35■□□□□ 0.21
TPM1-228ENST00000560975 COLEC12Q5KU26 742 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 KRT27Q7Z3Y8 459 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 P2RY8Q86VZ1 359 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 DPF3Q92784 378 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 NTAN1Q96AB6 310 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 FCRL5Q96RD9 977 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 ACOX2Q99424 681 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 DSN1Q9H410 356 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 RGS18Q9NS28 235 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 POLR3BQ9NW08 1133 aaPredicted RBP16.35■□□□□ 0.21
TPM1-228ENST00000560975 RBM22Q9NW64 420 aaKnown RBP eCLIP16.35■□□□□ 0.21
TPM1-228ENST00000560975 PCDHGA3Q9Y5H0 932 aa16.35■□□□□ 0.21
TPM1-228ENST00000560975 RFPL2O75678 378 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 GSNP06396 782 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 ANXA6P08133 673 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 FGF4P08620 206 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 ISL1P61371 349 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 COQ5Q5HYK3 327 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 CLEC20AQ6ZU45 233 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 USP43Q70EL4 1123 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 ARMCX6Q7L4S7 300 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 GPRIN1Q7Z2K8 1008 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 LRRC52Q8N7C0 313 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 DYNC2LI1Q8TCX1 351 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 MRGPRX2Q96LB1 330 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 RHNO1Q9BSD3 238 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 ASPSCR1Q9BZE9 553 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 PARVBQ9HBI1 364 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 FTH1P02794 183 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 NEK2P51955 445 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 GEMP55040 296 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 EMX2Q04743 252 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.34■□□□□ 0.21
TPM1-228ENST00000560975 BEND5Q7L4P6 421 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 LYSMD2Q8IV50 215 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 NIM1KQ8IY84 436 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 TXNDC15Q96J42 360 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 FEM1AQ9BSK4 669 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 BTBD2Q9BX70 525 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 OSBPL10Q9BXB5 764 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 NEK6Q9HC98 313 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 PDGFCQ9NRA1 345 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 LIMD1Q9UGP4 676 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 MAGEL2Q9UJ55 1249 aa16.34■□□□□ 0.21
TPM1-228ENST00000560975 ILVBLA1L0T0 632 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 NCF1BA6NI72 391 aaPredicted RBP16.33■□□□□ 0.21
TPM1-228ENST00000560975 NCF1CA8MVU1 366 aaPredicted RBP16.33■□□□□ 0.21
TPM1-228ENST00000560975 FADS2O95864 444 aaKnown RBP16.33■□□□□ 0.21
TPM1-228ENST00000560975 NCF1P14598 390 aaPredicted RBP16.33■□□□□ 0.21
TPM1-228ENST00000560975 CD1DP15813 335 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 ADRA1AP35348 466 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 HCAR3P49019 387 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 ARSDP51689 593 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 PPP5CP53041 499 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 AAK1Q2M2I8 961 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 UBE2UQ5VVX9 321 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 PAQR9Q6ZVX9 377 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 GALNT5Q7Z7M9 940 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 CILP2Q8IUL8 1156 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 PLD3Q8IV08 490 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 SLC22A15Q8IZD6 547 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 PSD4Q8NDX1 1056 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 SLC9A7Q96T83 725 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 PRDM8Q9NQV8 689 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 ENTPD7Q9NQZ7 604 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 AIG1Q9NVV5 245 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 NUDT5Q9UKK9 219 aa16.33■□□□□ 0.21
TPM1-228ENST00000560975 INTS6Q9UL03 887 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms