RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 APOC2P02655 101 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 PRR5P85299 388 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CD83Q01151 205 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ECHDC2Q86YB7 292 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CLP1Q92989 425 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 TUBB1Q9H4B7 451 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ERVK-5Q9HDB9 667 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ST3GAL4Q11206 333 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 LAPTM5Q13571 262 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 UBAP2Q5T6F2 1119 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 DNAAF5Q86Y56 855 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF431Q8TF32 576 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 BAP1Q92560 729 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC5A5Q92911 643 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 NPAS2Q99743 824 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 POPDC2Q9HBU9 364 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 NYAP2Q9P242 653 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF490Q9ULM2 529 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ARPC2O15144 300 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CFL1P23528 166 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 AZGP1P25311 298 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 SSR2P43308 183 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 MAGEA8P43361 318 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CCR3P51677 355 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 SERPINA13PQ6UXR4 307 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 HFE2Q6ZVN8 426 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 DCAKDQ8WVC6 231 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC38A4Q969I6 547 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 LINGO1Q96FE5 620 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 BRD7Q9NPI1 651 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 A0A0A0MRY4 1105 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 OR6C6A6NF89 314 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ENTPD6O75354 484 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 MAPTP10636 758 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 F8A1P23610 371 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CYP2C18P33260 490 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC6A3Q01959 620 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 PDK4Q16654 411 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CYP2U1Q7Z449 544 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 GPR135Q8IZ08 494 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 OXR1Q8N573 874 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 BEND7Q8N7W2 519 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 OR7D4Q8NG98 312 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 TNFRSF25Q93038 417 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 SPATA13Q96N96 652 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF717Q9BY31 904 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 DNAJC28Q9NX36 388 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 SMPD3Q9NY59 655 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 PTPRKQ15262 1439 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CCL15-CCL14A0A0B4J2E2 113 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 HDAC3O15379 428 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 MADCAM1Q13477 382 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CCL15Q16663 113 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 XKR4Q5GH76 650 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 GPR139Q6DWJ6 353 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 TTI2Q6NXR4 508 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 NOP16Q9Y3C1 178 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 GSTT2P0CG29 244 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 FAM171A1Q5VUB5 890 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 CAND1Q86VP6 1230 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 RBFAQ8N0V3 343 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 POP1Q99575 1024 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ALKBH4Q9NXW9 302 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC39A1Q9NY26 324 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ELOVL7A1L3X0 281 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 CACNB4O00305 520 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ANXA3P12429 323 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 FASTKD3Q14CZ7 662 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 STRA6Q9BX79 667 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 CCDC163A0A0D9SF12 145 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 C13orf42A0A1B0GVH6 325 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 CSTBP04080 98 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 KIAA1324Q6UXG2 1013 aaKnown RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF571Q7Z3V5 609 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 SEC14L1Q92503 715 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 EZH1Q92800 747 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 MIR1-1HGQ9H1L0 117 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 PARPBPQ9NWS1 579 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 CLDN4O14493 209 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 GABRB2P47870 512 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZDHHC20Q5W0Z9 365 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 SEPT12Q8IYM1 358 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 RAB2BQ8WUD1 216 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 TREX2Q9BQ50 279 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 HACL1Q9UJ83 578 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 SRRM3A6NNA2 597 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 STMND1H3BQB6 276 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 NME6O75414 186 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 UBXN7O94888 489 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ACADVLP49748 655 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 KLHL36Q8N4N3 616 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 CLPTM1LQ96KA5 538 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 UCK2Q9BZX2 261 aa13.74□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF225Q9UK10 706 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms