RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SLC12A2P55011 1212 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 TMEM115Q12893 351 aaPredicted RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 SRSF5Q13243 272 aaKnown RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 PDE1CQ14123 709 aaPredicted RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 RASA2Q15283 850 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 HSP90B2PQ58FF3 399 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 TTMPQ5BVD1 217 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 AGBL2Q5U5Z8 902 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 KCTD16Q68DU8 428 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 FAM45BPQ6NSW5 357 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 GCNT7Q6ZNI0 430 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 RAPH1Q70E73 1250 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 CMC1Q7Z7K0 106 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 ADGRG6Q86SQ4 1221 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 SRRM1Q8IYB3 904 aaKnown RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 RGL4Q8IZJ4 473 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 KRT222Q8N1A0 295 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 CLDN19Q8N6F1 224 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 CADM4Q8NFZ8 388 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 FAM45AQ8TCE6 357 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 HEXDCQ8WVB3 486 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 FOXJ1Q92949 421 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 FUBP1Q96AE4 644 aaKnown RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 SGF29Q96ES7 293 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 PGM2Q96G03 612 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 COX14Q96I36 57 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 SLC6A18Q96N87 628 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 BIRC8Q96P09 236 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 OLFM1Q99784 485 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 LGR4Q9BXB1 951 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 COL25A1Q9BXS0 654 aaPredicted RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 TEX101Q9BY14 249 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 ZCCHC2Q9C0B9 1178 aaKnown RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 MIR1-1HGQ9H1L0 117 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 PCED1AQ9H1Q7 454 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 P2RY12Q9H244 342 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 TRIM39Q9HCM9 518 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 SARS2Q9NP81 518 aaKnown RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 AASDHPPTQ9NRN7 309 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 ATXN10Q9UBB4 475 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 EIF2B4Q9UI10 523 aaKnown RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 MOSPD1Q9UJG1 213 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 FBXO4Q9UKT5 387 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 DMTF1Q9Y222 760 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 ZFC3H1O60293 1989 aaKnown RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 LRP4O75096 1905 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 TDRD6O60522 2096 aaKnown RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 GON4LQ3T8J9 2241 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 A6NNZ2 444 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 C10orf142B7Z368 130 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 PHGDHO43175 533 aaKnown RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 GPR37L1O60883 481 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 VPS26AO75436 327 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 CDK14O94921 469 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 AP2A2O94973 939 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TRIM16O95361 564 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 SYF2O95926 243 aaKnown RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 MYCLP1P12525 358 aaPredicted RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 STMN1P16949 149 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 ZNF8P17098 575 aaPredicted RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 CHRM3P20309 590 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 FDXRP22570 491 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 CD27P26842 260 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 MAOBP27338 520 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TYK2P29597 1187 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 PBLDP30039 288 aaPredicted RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 TRIM23P36406 574 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 POLD2P49005 469 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 DHPSP49366 369 aaPredicted RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 CTSCP53634 463 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 CDKN2DP55273 166 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TAS2R39P59534 338 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 POU4F1Q01851 419 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 ILF2Q12905 390 aaKnown RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 ZNF460Q14592 562 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 PLA2G4EQ3MJ16 856 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TAF1BQ53T94 588 aaPredicted RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 TMEM220Q6QAJ8 160 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 CRTC3Q6UUV7 619 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 CEP68Q76N32 757 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 LPCAT2Q7L5N7 544 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TRABD2AQ86V40 505 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 PIM3Q86V86 326 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TRAPPC5Q8IUR0 188 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 C4orf33Q8N1A6 199 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 BEND7Q8N7W2 519 aaPredicted RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 RASGEF1AQ8N9B8 481 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TMEM145Q8NBT3 493 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 LKAAEAR1Q8TD35 194 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 MZB1Q8WU39 189 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 GAB3Q8WWW8 586 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TSPAN17Q96FV3 270 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 ATP6V1G3Q96LB4 118 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 BMFQ96LC9 184 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 GPR21Q99679 349 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 VPS11Q9H270 941 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 SNX15Q9NRS6 342 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 PCMTD2Q9NV79 361 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms