RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TTYH1Q9H313 450 aaPredicted RBP3.67□□□□□ -1.82
SPG11-218ENST00000559754 SH2D4AQ9H788 454 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 CNGB3Q9NQW8 809 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 FAM96BQ9Y3D0 163 aa3.67□□□□□ -1.82
SPG11-218ENST00000559754 FAM237BA0A1B0GVD1 139 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 GOLGA6L9A6NEM1 432 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 GLOD5A6NK44 160 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 A8MV72 311 aaPredicted RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 CDRT15L2A8MXV6 281 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 ZNF587BE7ETH6 402 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 FAM72CH0Y354 149 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 NTN3O00634 580 aaPredicted RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 PSMA7O14818 248 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 MT-CYBP00156 380 aaPredicted RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 ATP5BP06576 529 aaKnown RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 HEXAP06865 529 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 FAM200BP0CF97 657 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 IRF1P10914 325 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 AGAP20933 346 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 USP8P40818 1118 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 CAPZA2P47755 286 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 CDH8P55286 799 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 BPIFB3P59826 476 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 PSMC6P62333 389 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 TMF1P82094 1093 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 EFNB1P98172 346 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 PKN2Q16513 984 aaKnown RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 CTF1Q16619 201 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 HIST2H2ACQ16777 129 aaPredicted RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 ZNF667Q5HYK9 610 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 FAM72AQ5TYM5 149 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 ADALQ6DHV7 355 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 KRT80Q6KB66 452 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 FAM72DQ6L9T8 149 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 FBXL22Q6P050 247 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 ZNF449Q6P9G9 518 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 DCLRE1AQ6PJP8 1040 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 TAOK1Q7L7X3 1001 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 LINGO2Q7L985 606 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 CHST3Q7LGC8 479 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 SDCCAG8Q86SQ7 713 aaPredicted RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 FAM72BQ86X60 149 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 DNAAF5Q86Y56 855 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 TICAM1Q8IUC6 712 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 EPHX4Q8IUS5 362 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 ARHGAP12Q8IWW6 846 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 LMNTD2Q8IXW0 634 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 NUP93Q8N1F7 819 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 ZCCHC9Q8N567 271 aaKnown RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 TEX9Q8N6V9 391 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 SYT2Q8N9I0 419 aaPredicted RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 POC5Q8NA72 575 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 IL17RCQ8NAC3 791 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 TMEM116Q8NCL8 245 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 APPL2Q8NEU8 664 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 OR13A1Q8NGR1 328 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 SPATA22Q8NHS9 363 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 LRRC8CQ8TDW0 803 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 DEPDC1BQ8WUY9 529 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 SMARCE1Q969G3 411 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 CCDC47Q96A33 483 aaKnown RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 INTS12Q96CB8 462 aaKnown RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 TBC1D31Q96DN5 1066 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 PGAM5Q96HS1 289 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 RAB3IPQ96QF0 476 aaPredicted RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 BBS4Q96RK4 519 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 LBHD1Q9BQE6 289 aaPredicted RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 C1RLQ9NZP8 487 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 C5AR2Q9P296 337 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 CPSF2Q9P2I0 782 aaKnown RBP3.66□□□□□ -1.82
SPG11-218ENST00000559754 WDR35Q9P2L0 1181 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 RCOR1Q9UKL0 485 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 TCF19Q9Y242 345 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 ADAM18Q9Y3Q7 739 aa3.66□□□□□ -1.82
SPG11-218ENST00000559754 TEX13CA0A0J9YWL9 993 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 A8MZ25 164 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 TAF4O00268 1085 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 GOSR1O95249 250 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 SLU7O95391 586 aaKnown RBP3.65□□□□□ -1.83
SPG11-218ENST00000559754 GGPS1O95749 300 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 MYBL1P10243 752 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 PBX3P40426 434 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 HNF4AP41235 474 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 TMPOP42166 694 aaKnown RBP3.65□□□□□ -1.83
SPG11-218ENST00000559754 GLIPR1P48060 266 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 CLCNKAP51800 687 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 FUT6P51993 359 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 MRPL12P52815 198 aaKnown RBP3.65□□□□□ -1.83
SPG11-218ENST00000559754 BRWD1-AS2P59051 145 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 UBXN1Q04323 297 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 NIPAL4Q0D2K0 466 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 PCLAFQ15004 111 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 GSTA3Q16772 222 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 MMEL1Q495T6 779 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 C9orf152Q5JTZ5 239 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 PAPPA-AS1Q5QFB9 102 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 LRRC8EQ6NSJ5 796 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 TRNP1Q6NT89 227 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 TATDN1Q6P1N9 297 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 TMEM81Q6P7N7 255 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms