RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ZNF547Q8IVP9 402 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 PPIL6Q8IXY8 311 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 NXPE1Q8N323 547 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 RASGEF1AQ8N9B8 481 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 GPR156Q8NFN8 814 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 OR13J1Q8NGT2 312 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 NAT6Q93015 286 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 HDAC10Q969S8 669 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 DCUN1D1Q96GG9 259 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 ZNF778Q96MU6 729 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 COPS8Q99627 209 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 OSGEPL1Q9H4B0 414 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 CHRAC1Q9NRG0 131 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 KLC4Q9NSK0 619 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 SYBUQ9NX95 663 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 DNAJC16Q9Y2G8 782 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 TRBV5-4A0A0C4DH59 114 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 CCDC162PA2VCL2 907 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 OR51F1A6NGY5 319 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 OR2AG2A6NM03 316 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 CFAP99D6REC4 459 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 DNALI1O14645 258 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-205ENST00000558428 SNX2O60749 519 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 GOT2P00505 430 aaKnown RBP12.18□□□□□ -0.46
SMAD3-205ENST00000558428 PRSS56P0CW18 603 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 RALBP11234 206 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 ZNF7P17097 686 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-205ENST00000558428 SPINK2P20155 84 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 ACRV1P26436 265 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 CTSCP53634 463 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 MAZP56270 477 aaKnown RBP12.18□□□□□ -0.46
SMAD3-205ENST00000558428 PRAMEP78395 509 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 E2F1Q01094 437 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 HLTFQ14527 1009 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMAD3-205ENST00000558428 C14orf28Q4W4Y0 310 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 PERM1Q5SV97 790 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 RNASEH2BQ5TBB1 312 aaKnown RBP12.18□□□□□ -0.46
SMAD3-205ENST00000558428 AFTPHQ6ULP2 937 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 CAND1Q86VP6 1230 aaKnown RBP12.18□□□□□ -0.46
SMAD3-205ENST00000558428 SERPINA9Q86WD7 417 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 JAMLQ86YT9 394 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 NAGSQ8N159 534 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 NAT8LQ8N9F0 302 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 MCUQ8NE86 351 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 OR6P1Q8NGX9 317 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 HEXDCQ8WVB3 486 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 PATE1Q8WXA2 126 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 PEX13Q92968 403 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.18□□□□□ -0.464e-6■■■■■ 31.4
SMAD3-205ENST00000558428 SERPINB12Q96P63 405 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 KRT12Q99456 494 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 TIMM29Q9BSF4 260 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 XAB2Q9HCS7 855 aaKnown RBP12.18□□□□□ -0.46
SMAD3-205ENST00000558428 SLC23A2Q9UGH3 650 aa12.18□□□□□ -0.46
SMAD3-205ENST00000558428 TTI1O43156 1089 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 AVILO75366 819 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 MLNP12872 115 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 VCLP18206 1134 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 FOXN2P32314 431 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 CLCNKAP51800 687 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 CLDN6P56747 220 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 B4GALNT1Q00973 533 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 ACVR1Q04771 509 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 C2orf54Q08AI8 447 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 BIRC2Q13490 618 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 DHX34Q14147 1143 aaKnown RBP12.17□□□□□ -0.46
SMAD3-205ENST00000558428 FNBP1LQ5T0N5 605 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 IZUMO3Q5VZ72 239 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 CASC4Q6P4E1 433 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 C11orf96Q7Z7L8 435 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 PCGF5Q86SE9 256 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 PIANPQ8IYJ0 282 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 GALNT15Q8N3T1 639 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 SPATA4Q8NEY3 305 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 OR6C4Q8NGE1 309 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 MAPK15Q8TD08 544 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 NAT14Q8WUY8 206 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 CCDC74AQ96AQ1 378 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 SGF29Q96ES7 293 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 CCDC97Q96F63 343 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-205ENST00000558428 ZNF514Q96K75 400 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-205ENST00000558428 TRIM51Q9BSJ1 452 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 KIFC1Q9BW19 673 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 SCNM1Q9BWG6 230 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 ABCG4Q9H172 646 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 MRM3Q9HC36 420 aaKnown RBP12.17□□□□□ -0.46
SMAD3-205ENST00000558428 ZDHHC3Q9NYG2 299 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 SAMD15Q9P1V8 674 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 TBC1D29Q9UFV1 150 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 ANGPTL2Q9UKU9 493 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 SOX13Q9UN79 622 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 WASF3Q9UPY6 502 aa12.17□□□□□ -0.46
SMAD3-205ENST00000558428 TRBV23OR9-2A0A075B6M9 112 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 NUDT21O43809 227 aaKnown RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 OPA1O60313 960 aa12.16□□□□□ -0.46
SMAD3-205ENST00000558428 POP7O75817 140 aaKnown RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 URI1O94763 535 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-205ENST00000558428 EML2O95834 649 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms