RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 FNBP1LQ5T0N5 605 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 C6orf132Q5T0Z8 1188 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 HIBCHQ6NVY1 386 aaPredicted RBP14.15□□□□□ -0.14
USP3-205ENST00000557884 ZCCHC8Q6NZY4 707 aaKnown RBP14.15□□□□□ -0.14
USP3-205ENST00000557884 TMEM220Q6QAJ8 160 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 LRRTM4Q86VH4 590 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 ZNF547Q8IVP9 402 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 SLC35F3Q8IY50 421 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 KYQ8NBH2 561 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 OR4L1Q8NH43 312 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 ZNF669Q96BR6 464 aaPredicted RBP14.15□□□□□ -0.14
USP3-205ENST00000557884 SGF29Q96ES7 293 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 COPS8Q99627 209 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 BOCQ9BWV1 1114 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 DPEP2Q9H4A9 486 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 MRM3Q9HC36 420 aaKnown RBP14.15□□□□□ -0.14
USP3-205ENST00000557884 TREX1Q9NSU2 369 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 SPATS2LQ9NUQ6 558 aaKnown RBP14.15□□□□□ -0.14
USP3-205ENST00000557884 ZDHHC3Q9NYG2 299 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 TAAR2Q9P1P5 351 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 SLC23A2Q9UGH3 650 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 ANAPC5Q9UJX4 755 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 DNAJC16Q9Y2G8 782 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 SCN8AQ9UQD0 1980 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 SPEGQ15772 3267 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 TRBV5-4A0A0C4DH59 114 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 LY6G6EA0A0G2JKS1 128 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 AGAP14A8MT82 685 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 GPR89AB7ZAQ6 455 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 GOLGA8KD6RF30 607 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 GOLGA8TH3BQL2 631 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 CHUKO15111 745 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 KMOO15229 486 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 SNX2O60749 519 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 GPR89BP0CG08 455 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 RALBP11234 206 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 PBLDP30039 288 aaPredicted RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 SLC7A5Q01650 507 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 DHX9Q08211 1270 aaKnown RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 TUBB2AQ13885 445 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 NR0B2Q15466 257 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 INSCQ1MX18 579 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 FASTKD1Q53R41 847 aaKnown RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 DNAJC21Q5F1R6 531 aaKnown RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 LVRNQ6Q4G3 990 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 OTUD6BQ8N6M0 293 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 BEND7Q8N7W2 519 aaPredicted RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 FAM181AQ8N9Y4 354 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 MNS1Q8NEH6 495 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 PEX13Q92968 403 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.14□□□□□ -0.15
USP3-205ENST00000557884 SIGLEC10Q96LC7 697 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 FCRL3Q96P31 734 aaPredicted RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 TUBB2BQ9BVA1 445 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 OSGEPL1Q9H4B0 414 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 KLC4Q9NSK0 619 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 IL1RAPL1Q9NZN1 696 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 MARCH4Q9P2E8 410 aaPredicted RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 U3KQA8 63 aa14.14□□□□□ -0.15
USP3-205ENST00000557884 TP53BP1Q12888 1972 aaPredicted RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 CNOT1A5YKK6 2376 aaKnown RBP14.14□□□□□ -0.15
USP3-205ENST00000557884 CPED1A4D0V7 1026 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 CTAGE15A4D2H0 777 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 CFAP99D6REC4 459 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 TP73O15350 636 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 VAPBO95292 243 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 FTH1P19P0C7X4 201 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 CTAGE8P0CG41 777 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 ZNF7P17097 686 aaPredicted RBP14.13□□□□□ -0.15
USP3-205ENST00000557884 CKMT2P17540 419 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 ARNTP27540 789 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 LRP8Q14114 963 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 SEMA3AQ14563 771 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 ANKRD20A4Q4UJ75 823 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 HP1BP3Q5SSJ5 553 aaPredicted RBP14.13□□□□□ -0.15
USP3-205ENST00000557884 DUPD1Q68J44 220 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 C8orf74Q6P047 294 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 GUSBP11Q6P575 273 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 GLRX5Q86SX6 157 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 LDB1Q86U70 411 aaPredicted RBP14.13□□□□□ -0.15
USP3-205ENST00000557884 CTAGE6Q86UF2 777 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 SLCO6A1Q86UG4 719 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 CTAGE4Q8IX94 777 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 SDR16C5Q8N3Y7 309 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 ARL10Q8N8L6 244 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 NOA1Q8NC60 698 aaKnown RBP14.13□□□□□ -0.15
USP3-205ENST00000557884 ZDHHC1Q8WTX9 485 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 PATE1Q8WXA2 126 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 GLMNQ92990 594 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 STAMBPL1Q96FJ0 436 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 LRRC1Q9BTT6 524 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 CATSPERZQ9NTU4 200 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 TOR4AQ9NXH8 423 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 FAM8A1Q9UBU6 413 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 UTP11Q9Y3A2 253 aaKnown RBP14.13□□□□□ -0.15
USP3-205ENST00000557884 RPS6KL1Q9Y6S9 549 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 MYLKQ15746 1914 aa14.13□□□□□ -0.15
USP3-205ENST00000557884 SPTBN2O15020 2390 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 IGLV3-16A0A075B6K0 115 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 TRBV23OR9-2A0A075B6M9 112 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms