RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 EIF3FO00303 357 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 QSOX1O00391 747 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 BTN3A1O00481 513 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 NEMP1O14524 444 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 SYNCRIPO60506 623 aaKnown RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 SLC25A14O95258 325 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 TRIM16O95361 564 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 ADH1BP00325 375 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 CBSLP0DN79 551 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 KCNA5P22460 613 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 AKT1P31749 480 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 CBSP35520 551 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 SOX9P48436 509 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 KCNC1P48547 511 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 RPL14P50914 215 aaKnown RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 GALNT1Q10472 559 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 SMAD4Q13485 552 aaKnown RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 CAMK2GQ13555 558 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 AAK1Q2M2I8 961 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 GALNTL6Q49A17 601 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 LDLRAP1Q5SW96 308 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 ADAMTSL2Q86TH1 951 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 RALGPS2Q86X27 583 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 MMAAQ8IVH4 418 aaKnown RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 MYO1HQ8N1T3 1032 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 AFAP1L2Q8N4X5 818 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 ZBTB2Q8N680 514 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 CLDN19Q8N6F1 224 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 ZNF781Q8N8C0 355 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 DDHD1Q8NEL9 900 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 EEF1AKMT1Q8WVE0 214 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 SCAMP4Q969E2 229 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 AP2M1Q96CW1 435 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 ERP27Q96DN0 273 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 DTD2Q96FN9 168 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 TMEM237Q96Q45 408 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 VPS35Q96QK1 796 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 WRAP53Q9BUR4 548 aaKnown RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 RIOK2Q9BVS4 552 aaKnown RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 RSPH9Q9H1X1 276 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 ABCG8Q9H221 673 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 C8orf33Q9H7E9 229 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 FBRSQ9HAH7 460 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 CYP4F12Q9HCS2 524 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 PNPOQ9NVS9 261 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 KCTD5Q9NXV2 234 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 VTI1BQ9UEU0 232 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 ZFP69BQ9UJL9 534 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 APOBEC2Q9Y235 224 aaKnown RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 RRP15Q9Y3B9 282 aaKnown RBP12.33□□□□□ -0.44
SHMT2-233ENST00000557529 NPEPPSL1A6NEC2 478 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 SUPT3HB4E1H0 165 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 H3BQ06 376 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 K7EQS6 105 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 CDC7O00311 574 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 KPNA5O15131 536 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 SPINT1O43278 529 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 CCDC22O60826 627 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 SUPT3HO75486 399 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 UBOX5O94941 541 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 MTHFD2P13995 350 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 GFAPP14136 432 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 ATP1B2P14415 290 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 MSH3P20585 1137 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 CTHP32929 405 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 KIR2DL1P43626 348 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 RGS19P49795 217 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 METAP1P53582 386 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 HERVK_113P63132 956 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 CREB5Q02930 508 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 TSNQ15631 228 aaKnown RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 ZNF678Q5SXM1 525 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 SDE2Q6IQ49 451 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 TXNDC11Q6PKC3 985 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 NLRP8Q86W28 1048 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 GPSM1Q86YR5 675 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 SPNS2Q8IVW8 549 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 LSMEM2Q8N112 164 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 FBXO39Q8N4B4 442 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 PTGR2Q8N8N7 351 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 BTN2A2Q8WVV5 523 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 STON2Q8WXE9 905 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 DNASE1L2Q92874 299 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 EXT2Q93063 718 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 FUBP1Q96AE4 644 aaKnown RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 PHF21BQ96EK2 531 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 CCDC97Q96F63 343 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 FAR2Q96K12 515 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 RILPQ96NA2 401 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 ERVK-6Q9BXR3 956 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 MYLK2Q9H1R3 596 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 FBRSL1Q9HCM7 1045 aaKnown RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 TMPRSS11EQ9UL52 423 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 ITM2BQ9Y287 266 aa12.32□□□□□ -0.44
SHMT2-233ENST00000557529 RANBP2P49792 3224 aaKnown RBP12.32□□□□□ -0.44
SHMT2-233ENST00000557529 GRXCR2A6NFK2 248 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 C2CD4DB7Z1M9 353 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms