RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 RHOQP17081 205 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 TNFAIP3P21580 790 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 RPL13P26373 211 aaKnown RBP9.2□□□□□ -0.94
NEDD1-211ENST00000557454 FOXL2P58012 376 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 SSPNQ14714 243 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 SLC39A14Q15043 492 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 MEA1Q16626 185 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 CYP2A13Q16696 494 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 MANEALQ5VSG8 457 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 ADAMTSL4Q6UY14 1074 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 C11orf57Q6ZUT1 292 aaPredicted RBP9.2□□□□□ -0.94
NEDD1-211ENST00000557454 Q6ZVL8 140 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 PPP1R32Q7Z5V6 425 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 FAM131BQ86XD5 332 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 CA5BP1Q8WTZ4 195 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 SHC3Q92529 594 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 PGAP3Q96FM1 320 aaPredicted RBP9.2□□□□□ -0.94
NEDD1-211ENST00000557454 NT5C1BQ96P26 610 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 USP28Q96RU2 1077 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 MAP3K3Q99759 626 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 DNAJB12Q9NXW2 375 aaKnown RBP9.2□□□□□ -0.94
NEDD1-211ENST00000557454 CD84Q9UIB8 345 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 STAP1Q9ULZ2 295 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 MEMO1Q9Y316 297 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 MORC2Q9Y6X9 1032 aaPredicted RBP9.2□□□□□ -0.94
NEDD1-211ENST00000557454 FAM171A2A8MVW0 826 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 FOXO6A8MYZ6 492 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 DDX3YO15523 660 aaKnown RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 LETM1O95202 739 aaPredicted RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 LCA5LO95447 670 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 ERBB2P04626 1255 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 ATP1A1P05023 1023 aaKnown RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 EPB41P11171 864 aaKnown RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 LHCGRP22888 699 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 HADHAP40939 763 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 SLC19A1P41440 591 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 DGKQP52824 942 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 AIMP2Q13155 320 aaKnown RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 MYBPHQ13203 477 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 GPR18Q14330 331 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 CES4AQ5XG92 561 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 LINC00696Q6ZRV3 163 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 RFLNAQ6ZTI6 216 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 RRAGAQ7L523 313 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 PHYKPLQ8IUZ5 450 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 PASD1Q8IV76 773 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 TMEM151BQ8IW70 566 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 D2HGDHQ8N465 521 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 LZTR1Q8N653 840 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 DNAAF3Q8N9W5 541 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 OR8K5Q8NH50 307 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 SNX21Q969T3 373 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 SDCCAG3Q96C92 435 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 OSGEPL1Q9H4B0 414 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 NOL6Q9H6R4 1146 aaKnown RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF395Q9H8N7 513 aaPredicted RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 ACP6Q9NPH0 428 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF358Q9NW07 568 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 KCTD5Q9NXV2 234 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF624Q9P2J8 865 aaPredicted RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 UBA2Q9UBT2 640 aaPredicted RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 SIK3Q9Y2K2 1263 aa9.19□□□□□ -0.94
NEDD1-211ENST00000557454 PTRH2Q9Y3E5 179 aaKnown RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 INTS1Q8N201 2190 aaKnown RBP9.19□□□□□ -0.94
NEDD1-211ENST00000557454 FAM72CH0Y354 149 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 TRAFD1O14545 582 aaPredicted RBP9.18□□□□□ -0.94
NEDD1-211ENST00000557454 SEC16AO15027 2179 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 MED7O43513 233 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 CUTAO60888 179 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 WISP2O76076 250 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 KRT5P13647 590 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 XRCC1P18887 633 aaPredicted RBP9.18□□□□□ -0.94
NEDD1-211ENST00000557454 VIPR1P32241 457 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 FOLR3P41439 243 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 POLR2LP62875 67 aaKnown RBP9.18□□□□□ -0.94
NEDD1-211ENST00000557454 HSD11B2P80365 405 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 PPP2R2BQ00005 443 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 SLC6A3Q01959 620 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 BCL2L1Q07817 233 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 INAQ16352 499 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 ZFYVE27Q5T4F4 411 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 FAM72AQ5TYM5 149 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 FAM72DQ6L9T8 149 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 SHC4Q6S5L8 630 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 TECPR1Q7Z6L1 1165 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 SRLQ86TD4 932 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 FAM72BQ86X60 149 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 KMT5CQ86Y97 462 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 ARHGEF19Q8IW93 802 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 DMRTC2Q8IXT2 367 aaPredicted RBP9.18□□□□□ -0.94
NEDD1-211ENST00000557454 WDTC1Q8N5D0 677 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF397Q8NF99 534 aaPredicted RBP9.18□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF606Q8WXB4 792 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 NT5C3BQ969T7 300 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 COX14Q96I36 57 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 MAGED4Q96JG8 741 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 AGAP2Q99490 1192 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 DHRS4Q9BTZ2 278 aa9.18□□□□□ -0.94
NEDD1-211ENST00000557454 RAB33BQ9H082 229 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms