RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 NKAIN2Q5VXU1 208 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 ALG1LQ6GMV1 187 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 CLEC18BQ6UXF7 455 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 APTXQ7Z2E3 356 aaKnown RBP8.59□□□□□ -1.03
VRK1-206ENST00000557222 GALNT13Q8IUC8 556 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 PGBD5Q8N414 524 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 ATPAF2Q8N5M1 289 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 CLEC18CQ8NCF0 446 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 EXD1Q8NHP7 514 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 PDCD6IPQ8WUM4 868 aaKnown RBP8.59□□□□□ -1.03
VRK1-206ENST00000557222 TEKT4Q8WW24 435 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 PATE1Q8WXA2 126 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 AP2M1Q96CW1 435 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 RTP4Q96DX8 246 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 COX14Q96I36 57 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 LYSMD1Q96S90 227 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 SLC38A3Q99624 504 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 HERPUD2Q9BSE4 406 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.59□□□□□ -1.03
VRK1-206ENST00000557222 ABCG8Q9H221 673 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 OCIAD1Q9NX40 245 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 AIPL1Q9NZN9 384 aa8.59□□□□□ -1.03
VRK1-206ENST00000557222 RCOR3Q9P2K3 495 aaPredicted RBP8.59□□□□□ -1.03
VRK1-206ENST00000557222 RPL26L1Q9UNX3 145 aaKnown RBP8.59□□□□□ -1.03
VRK1-206ENST00000557222 KIR2DS5A0A0G2JLQ3 304 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 A0A0G2JNG1 304 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 A0A0J9YYE9 177 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 GOLGA6CA6NDK9 693 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 GOLGA6BA6NDN3 693 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 KIR2DS3K7RE56 304 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 AGRPO00253 132 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 TOX3O15405 576 aaPredicted RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 RECKO95980 971 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 TRBC1P01850 177 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 ANKRD34CP0C6C1 535 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 GOLGA6DP0CG33 693 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 CA4P22748 312 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 NOP2P46087 812 aaKnown RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 CLCNKAP51800 687 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 STC1P52823 247 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 HHEXQ03014 270 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 KIR2DS5Q14953 304 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 LRRC66Q68CR7 880 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 DENND2CQ68D51 928 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 ANKS6Q68DC2 871 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 IYDQ6PHW0 289 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 SASS6Q6UVJ0 657 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 SLC9B2Q86UD5 537 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 TSPAN33Q86UF1 283 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 FAM129CQ86XR2 697 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 TP53INP2Q8IXH6 220 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 ESX1Q8N693 406 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 NIPA2Q8N8Q9 360 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 C9orf43Q8TAL5 461 aaPredicted RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 SLC37A2Q8TED4 501 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 APOBEC4Q8WW27 367 aaKnown RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 JPH3Q8WXH2 748 aaPredicted RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 CSPG4P5Q96PW8 444 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 POLR1EQ9GZS1 481 aaKnown RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 ISCUQ9H1K1 167 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 GPN2Q9H9Y4 310 aaPredicted RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 UCK1Q9HA47 277 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 LMBRD1Q9NUN5 540 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 GOLGA6AQ9NYA3 693 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 ANKMY1Q9P2S6 941 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 CNOT8Q9UFF9 292 aaKnown RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 TMEM98Q9Y2Y6 226 aa8.58□□□□□ -1.04
VRK1-206ENST00000557222 ZFC3H1O60293 1989 aaKnown RBP8.58□□□□□ -1.04
VRK1-206ENST00000557222 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 LILRA5A6NI73 299 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 TMCO5BA8MYB1 307 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 GPR89AB7ZAQ6 455 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 DNAJC6O75061 913 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 GPR89BP0CG08 455 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 ACPPP15309 386 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 IL1R2P27930 398 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 CDC25BP30305 580 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 EPHB1P54762 984 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 CDC20Q12834 499 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 SEPT6Q14141 434 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 NCAPHQ15003 741 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 STX1AQ16623 288 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 TIGD7Q6NT04 549 aaPredicted RBP8.57□□□□□ -1.04
VRK1-206ENST00000557222 DOK6Q6PKX4 331 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 ZNF571Q7Z3V5 609 aaPredicted RBP8.57□□□□□ -1.04
VRK1-206ENST00000557222 PLXDC1Q8IUK5 500 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 FAM71BQ8TC56 605 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 MAML1Q92585 1016 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 SCAMP4Q969E2 229 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 PMEPA1Q969W9 287 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 TSGA13Q96PP4 275 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 TRIM7Q9C029 511 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 ADAM19Q9H013 955 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 EPN3Q9H201 632 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 SUDS3Q9H7L9 328 aaPredicted RBP8.57□□□□□ -1.04
VRK1-206ENST00000557222 ETNK2Q9NVF9 386 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 TMEM9Q9P0T7 183 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 PLEKHM1Q9Y4G2 1056 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms