RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 RBAKQ9NYW8 714 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 CTTNBP2NLQ9P2B4 639 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 SUCLA2Q9P2R7 463 aaPredicted RBP5.21□□□□□ -1.58
SRP54-211ENST00000556445 ZNF212Q9UDV6 495 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TRIM10Q9UDY6 481 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 ZNHIT2Q9UHR6 403 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 AMFRQ9UKV5 643 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 DAPP1Q9UN19 280 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 CDYLQ9Y232 598 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 TNFSF13BQ9Y275 285 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 Q9Y3F1 56 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 MCM3APO60318 1980 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 ADGRA3Q8IWK6 1321 aa5.21□□□□□ -1.58
SRP54-211ENST00000556445 A0A0U1RQJ8 604 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 KRT87PA6NCN2 255 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 E7EVH7 732 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 H0YAE9 185 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 F2RL2O00254 374 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 BTN3A1O00481 513 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 DNPH1O43598 174 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 BUB1O43683 1085 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 TBC1D4O60343 1298 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 PALMO75781 387 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 SNX4O95219 450 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 GLP2RO95838 553 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 HLA-DRAP01903 254 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 TNNC2P02585 160 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 TMEM191BP0C7N4 346 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 FTH1P19P0C7X4 201 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 MYBL1P10243 752 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 DLATP10515 647 aaKnown RBP5.2□□□□□ -1.58
SRP54-211ENST00000556445 MCF2P10911 925 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 BTF3P20290 206 aaKnown RBP5.2□□□□□ -1.58
SRP54-211ENST00000556445 MARK3P27448 753 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 PGM1P36871 562 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 USP8P40818 1118 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 GALCP54803 685 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 SOX10P56693 466 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 HUNKP57058 714 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 STARD6P59095 220 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 PTENP60484 403 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 TNNC1P63316 161 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 GPC5P78333 572 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 RPP30P78346 268 aaKnown RBP5.2□□□□□ -1.58
SRP54-211ENST00000556445 ARHGAP1Q07960 439 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 SREBF2Q12772 1141 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 RPS6KA1Q15418 735 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 SGSM1Q2NKQ1 1148 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 PLEKHS1Q5SXH7 462 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 C1orf220Q5T0J3 134 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 ATF7IP2Q5U623 682 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 SP5Q6BEB4 398 aaPredicted RBP5.2□□□□□ -1.58
SRP54-211ENST00000556445 ANO7Q6IWH7 933 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 WDR93Q6P2C0 686 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 C15orf39Q6ZRI6 1047 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 LRRC8DQ7L1W4 858 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 PEX26Q7Z412 305 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 ZNF410Q86VK4 478 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 METTL23Q86XA0 190 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 RHPN2Q8IUC4 686 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 SCN4BQ8IWT1 228 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 C10orf53Q8N6V4 93 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 OR6J1Q8NGC5 347 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 NFKBIDQ8NI38 313 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 SOCS4Q8WXH5 440 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.2□□□□□ -1.58
SRP54-211ENST00000556445 PTCD3Q96EY7 689 aaKnown RBP5.2□□□□□ -1.58
SRP54-211ENST00000556445 LRIG1Q96JA1 1093 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 VCPIP1Q96JH7 1222 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 AIFM2Q9BRQ8 373 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 SYT11Q9BT88 431 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 THUMPD3Q9BV44 507 aaKnown RBP5.2□□□□□ -1.58
SRP54-211ENST00000556445 KIFC3Q9BVG8 833 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 CCDC94Q9BW85 323 aaPredicted RBP5.2□□□□□ -1.58
SRP54-211ENST00000556445 FUT8Q9BYC5 575 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 ZNF518BQ9C0D4 1074 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 ZCWPW1Q9H0M4 648 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 ISCUQ9H1K1 167 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 C1orf21Q9H246 121 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 FZD8Q9H461 694 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 ASB7Q9H672 318 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 OPA3Q9H6K4 179 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 RPF1Q9H9Y2 349 aaKnown RBP5.2□□□□□ -1.58
SRP54-211ENST00000556445 SNX15Q9NRS6 342 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 OGFRQ9NZT2 677 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 UVRAGQ9P2Y5 699 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 CACNG4Q9UBN1 327 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 DNAJB9Q9UBS3 223 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 RAB21Q9UL25 225 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 NENFQ9UMX5 172 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 MED16Q9Y2X0 877 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 PCDHB2Q9Y5E7 798 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 ADGRA2Q96PE1 1338 aa5.2□□□□□ -1.58
SRP54-211ENST00000556445 ZSWIM8A7E2V4 1837 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 PRAMEF33A0A0G2JMD5 474 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 A0A1W2PQ09 198 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 TMCO5BA8MYB1 307 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 E9PLN8 166 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 CCDC188H7C350 402 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 PYCARD-AS1I3L0S3 204 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms