RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 TRAPPC5Q8IUR0 188 aa18.16■□□□□ 0.5
NEDD1-208ENST00000555806 TTC13Q8NBP0 860 aa18.16■□□□□ 0.5
NEDD1-208ENST00000555806 SH3KBP1Q96B97 665 aa18.16■□□□□ 0.5
NEDD1-208ENST00000555806 DPYSL5Q9BPU6 564 aa18.16■□□□□ 0.5
NEDD1-208ENST00000555806 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.16■□□□□ 0.5
NEDD1-208ENST00000555806 TMPRSS11EQ9UL52 423 aa18.16■□□□□ 0.5
NEDD1-208ENST00000555806 CAPN6Q9Y6Q1 641 aa18.16■□□□□ 0.5
NEDD1-208ENST00000555806 CACNA1GO43497 2377 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 A6NCN8 305 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 PDZK1P1A8MUH7 402 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 DDX3YO15523 660 aaKnown RBP18.15■□□□□ 0.5
NEDD1-208ENST00000555806 GPR39O43194 453 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 HOXB3P14651 431 aaPredicted RBP18.15■□□□□ 0.5
NEDD1-208ENST00000555806 ETV5P41161 510 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 MAPK9P45984 424 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 LIMK2P53671 638 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 TMEM115Q12893 351 aaPredicted RBP18.15■□□□□ 0.5
NEDD1-208ENST00000555806 SEPT7Q16181 437 aaKnown RBP18.15■□□□□ 0.5
NEDD1-208ENST00000555806 GPR155Q7Z3F1 870 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 AVL9Q8NBF6 648 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 OR4D9Q8NGE8 314 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 PPP1R2P1Q96PQ5 205 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 TIMM29Q9BSF4 260 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 ZCCHC2Q9C0B9 1178 aaKnown RBP18.15■□□□□ 0.5
NEDD1-208ENST00000555806 CPNE5Q9HCH3 593 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 CPNE7Q9UBL6 633 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 SLC23A2Q9UGH3 650 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 ARL5AQ9Y689 179 aa18.15■□□□□ 0.5
NEDD1-208ENST00000555806 C2orf81A6NN90 581 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 HGSO14964 777 aaPredicted RBP18.14■□□□□ 0.49
NEDD1-208ENST00000555806 UGT1A9O60656 530 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 PPFIA2O75334 1257 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 VCLP18206 1134 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 UGT1A6P19224 532 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 LPOP22079 712 aaPredicted RBP18.14■□□□□ 0.49
NEDD1-208ENST00000555806 UGT1A1P22309 533 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 UGT1A4P22310 534 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 ADRA1AP35348 466 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 UGT1A3P35503 534 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 GSDMDP57764 484 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 CLN3Q13286 438 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 TRA2AQ13595 282 aaKnown RBP eCLIP18.14■□□□□ 0.49
NEDD1-208ENST00000555806 ITGA9Q13797 1035 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 PTPRCAPQ14761 206 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 LDLRAP1Q5SW96 308 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 TMEM71Q6P5X7 295 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 RANBP10Q6VN20 620 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 ARHGEF18Q6ZSZ5 1173 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 ZNF547Q8IVP9 402 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 TRIM48Q8IWZ4 208 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 DTX3LQ8TDB6 740 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 BRSK1Q8TDC3 778 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 USP7Q93009 1102 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 LRRC45Q96CN5 670 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 TBL1YQ9BQ87 522 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.14■□□□□ 0.49
NEDD1-208ENST00000555806 TSGA10Q9BZW7 698 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 UGT1A7Q9HAW7 530 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 UGT1A10Q9HAW8 530 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 UGT1A8Q9HAW9 530 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 TMEM9Q9P0T7 183 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 PTPRQQ9UMZ3 2332 aa18.14■□□□□ 0.49
NEDD1-208ENST00000555806 PRAMEF33A0A0G2JMD5 474 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 NVLO15381 856 aaKnown RBP18.13■□□□□ 0.49
NEDD1-208ENST00000555806 PRAMEF10O60809 474 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 THRAP10827 490 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 CSTF2P33240 577 aaKnown RBP eCLIP18.13■□□□□ 0.49
NEDD1-208ENST00000555806 CFHR1Q03591 330 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 SQSTM1Q13501 440 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 SPARCL1Q14515 664 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 TAF1AQ15573 450 aaPredicted RBP18.13■□□□□ 0.49
NEDD1-208ENST00000555806 SOWAHCQ53LP3 525 aaPredicted RBP18.13■□□□□ 0.49
NEDD1-208ENST00000555806 SNAP47Q5SQN1 464 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 ARHGAP40Q5TG30 622 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 TMEM164Q5U3C3 297 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 RNF10Q8N5U6 811 aaKnown RBP18.13■□□□□ 0.49
NEDD1-208ENST00000555806 FAM71DQ8N9W8 422 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 OR4K2Q8NGD2 314 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 NCSTNQ92542 709 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 HES6Q96HZ4 224 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 UBL7Q96S82 380 aaPredicted RBP18.13■□□□□ 0.49
NEDD1-208ENST00000555806 SCHIP1Q9P0W5 487 aaPredicted RBP18.13■□□□□ 0.49
NEDD1-208ENST00000555806 GUCA1BQ9UMX6 200 aa18.13■□□□□ 0.49
NEDD1-208ENST00000555806 TEX51A0A1B0GUA7 166 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 C5orf60A6NFR6 353 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 EIF4E1BA6NMX2 242 aaKnown RBP18.12■□□□□ 0.49
NEDD1-208ENST00000555806 GAPDHSO14556 408 aaPredicted RBP18.12■□□□□ 0.49
NEDD1-208ENST00000555806 KRT86O43790 486 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 PRAMEF1O95521 474 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 VIPP01282 170 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 CCL4P13236 92 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 IDSP22304 550 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 RPL10P27635 214 aaKnown RBP18.12■□□□□ 0.49
NEDD1-208ENST00000555806 AKT1P31749 480 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 EPHA4P54764 986 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 UBE2IP63279 158 aaKnown RBP18.12■□□□□ 0.49
NEDD1-208ENST00000555806 KLF1Q13351 362 aaPredicted RBP18.12■□□□□ 0.49
NEDD1-208ENST00000555806 GPRC6AQ5T6X5 926 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 SEL1L2Q5TEA6 688 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 AGBL5Q8NDL9 886 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms