RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 MARK2Q7KZI7 788 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 RD3Q7Z3Z2 195 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 LRRTM4Q86VH4 590 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 CNTN4Q8IWV2 1026 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 DCLK2Q8N568 766 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 CDKL2Q92772 493 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 LRRC4CQ9HCJ2 640 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 PARD6AQ9NPB6 346 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 IARS2Q9NSE4 1012 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 INTS10Q9NVR2 710 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 TRNAU1APQ9NX07 287 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 IL1RAPL1Q9NZN1 696 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 SPASTQ9UBP0 616 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 APOBEC3BQ9UH17 382 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 GPR34Q9UPC5 381 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 TNRC6BQ9UPQ9 1833 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 PLXNA2O75051 1894 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 KMOO15229 486 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 FUCA1P04066 466 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 CTSEP14091 401 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 STX2P32856 288 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 GNPDA1P46926 289 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 CCT8P50990 548 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 GPX6P59796 221 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 VSNL1P62760 191 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 B4GALNT1Q00973 533 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 MGAT5Q09328 741 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 LRP8Q14114 963 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 SMAD1Q15797 465 aaKnown RBP14.1□□□□□ -0.15
CHD8-208ENST00000555301 KYNUQ16719 465 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 AASDHQ4L235 1098 aaPredicted RBP14.1□□□□□ -0.15
CHD8-208ENST00000555301 PYCR3Q53H96 274 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 PRAMEF14Q5SWL7 426 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 TRMT10BQ6PF06 316 aaKnown RBP14.1□□□□□ -0.15
CHD8-208ENST00000555301 CAPN12Q6ZSI9 719 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 MICALCLQ6ZW33 695 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 LDB1Q86U70 411 aaPredicted RBP14.1□□□□□ -0.15
CHD8-208ENST00000555301 LRRC6Q86X45 466 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 TRAPPC5Q8IUR0 188 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 UNC5BQ8IZJ1 945 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 FSTL5Q8N475 847 aaPredicted RBP14.1□□□□□ -0.15
CHD8-208ENST00000555301 MINDY1Q8N5J2 469 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 RASGEF1AQ8N9B8 481 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 OR2M4Q96R27 311 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 EDEM2Q9BV94 578 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 BOCQ9BWV1 1114 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 CLPBQ9H078 707 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 CDC42EP4Q9H3Q1 356 aaKnown RBP14.1□□□□□ -0.15
CHD8-208ENST00000555301 VPS37BQ9H9H4 285 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 NSMCE4AQ9NXX6 385 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 NINJ2Q9NZG7 142 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 ZFATQ9P243 1243 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 ZNHIT2Q9UHR6 403 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 KLF15Q9UIH9 416 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 FBXO5Q9UKT4 447 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 PNMA8BQ9ULN7 279 aaPredicted RBP14.1□□□□□ -0.15
CHD8-208ENST00000555301 GPSM3Q9Y4H4 160 aa14.1□□□□□ -0.15
CHD8-208ENST00000555301 DNMT3AQ9Y6K1 912 aaPredicted RBP14.1□□□□□ -0.15
CHD8-208ENST00000555301 TCRBV9S1A1TA0A576 114 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 KLHL33A6NCF5 533 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 PRMT5O14744 637 aaPredicted RBP14.09□□□□□ -0.15
CHD8-208ENST00000555301 GFRA3O60609 400 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 KCNJ13O60928 360 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 PIAS2O75928 621 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 OR56A5P0C7T3 313 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 ZNF883P0CG24 379 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 MYBL2P10244 700 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 EPHA8P29322 1005 aaPredicted RBP14.09□□□□□ -0.15
CHD8-208ENST00000555301 SLC1A2P43004 574 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 ADARP55265 1226 aaKnown RBP14.09□□□□□ -0.15
CHD8-208ENST00000555301 ILF3Q12906 894 aaKnown RBP eCLIP14.09□□□□□ -0.15
CHD8-208ENST00000555301 CTBP1Q13363 440 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 ELOCQ15369 112 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 BCL7AQ4VC05 210 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 PRRT3Q5FWE3 981 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 TEDDM1Q5T9Z0 273 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 KCTD16Q68DU8 428 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 TMEM220Q6QAJ8 160 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 TRMT10CQ7L0Y3 403 aaKnown RBP14.09□□□□□ -0.15
CHD8-208ENST00000555301 DET1Q7L5Y6 550 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 GALNT7Q86SF2 657 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 DENND6AQ8IWF6 608 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 GSPT2Q8IYD1 628 aaKnown RBP14.09□□□□□ -0.15
CHD8-208ENST00000555301 SDR16C5Q8N3Y7 309 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 C2CD4AQ8NCU7 369 aaPredicted RBP14.09□□□□□ -0.15
CHD8-208ENST00000555301 SGF29Q96ES7 293 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 PARD6BQ9BYG5 372 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 IL21RQ9HBE5 538 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 TMEM9BQ9NQ34 198 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 TM7SF3Q9NS93 570 aa14.09□□□□□ -0.15
CHD8-208ENST00000555301 DNAAF2Q9NVR5 837 aaKnown RBP14.09□□□□□ -0.15
CHD8-208ENST00000555301 LRRK1Q38SD2 2015 aa14.08□□□□□ -0.15
CHD8-208ENST00000555301 UBA6A0AVT1 1052 aaPredicted RBP14.08□□□□□ -0.16
CHD8-208ENST00000555301 NEMP2A6NFY4 417 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 OR2AG2A6NM03 316 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 AQP9O43315 295 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 PCDHGA12O60330 932 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 OR1I1O60431 355 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 S1PR4O95977 384 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms