RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TBK1Q9UHD2 729 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 PPM1HQ9ULR3 514 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ACTL7BQ9Y614 415 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 AHCTF1Q8WYP5 2266 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 C16orf96A6NNT2 1141 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 H7C0S8 307 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 IL1BP01584 269 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 CTSLP07711 333 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 VIPR1P32241 457 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 ELP6Q0PNE2 266 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 CAMK2GQ13555 558 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-208ENST00000553868 TNFAIP8L3Q5GJ75 292 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 AARS2Q5JTZ9 985 aaKnown RBP14.37□□□□□ -0.11
SHMT2-208ENST00000553868 KCTD16Q68DU8 428 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 ZNF470Q6ECI4 717 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 STRA8Q7Z7C7 330 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 GALNT7Q86SF2 657 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 SDCCAG8Q86SQ7 713 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-208ENST00000553868 TTC7BQ86TV6 843 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 ZSWIM9Q86XI8 627 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 UNC5BQ8IZJ1 945 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 OR13C4Q8NGS5 318 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 OR4L1Q8NH43 312 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 VOPP1Q96AW1 172 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 CDKN2AIPNLQ96HQ2 116 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 SGSM3Q96HU1 749 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 GABRG3Q99928 467 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 IL17CQ9P0M4 197 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 CTNNAL1Q9UBT7 734 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 FTSJ1Q9UET6 329 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 APPL1Q9UKG1 709 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 VPS9D1Q9Y2B5 631 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 KCTD3Q9Y597 815 aa14.37□□□□□ -0.11
SHMT2-208ENST00000553868 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 NPIPB15A6NHN6 443 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 AURKAO14965 403 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 BUD23O43709 281 aaKnown RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 ADH1BP00325 375 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 MT-ND3P03897 115 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 TIMP2P16035 220 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 OGNP20774 298 aaKnown RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 ARNTP27540 789 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 PPARGP37231 505 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 NEK3P51956 506 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 TMPRSS3P57727 454 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 MAGOHP61326 146 aaKnown RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 TMPRSS15P98073 1019 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 NFKB2Q00653 900 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 TBC1D25Q3MII6 688 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 FASTKD1Q53R41 847 aaKnown RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 ZNF776Q68DI1 518 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 FBXL19Q6PCT2 694 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 CRTC1Q6UUV9 634 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 CBARPQ8N350 705 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 C2CD4AQ8NCU7 369 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 GPR150Q8NGU9 434 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 OR2T3Q8NH03 318 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 C1orf216Q8TAB5 229 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 FAM76AQ8TAV0 307 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 RAB7BQ96AH8 199 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 ALKBH8Q96BT7 664 aaKnown RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 TBATAQ96M53 351 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 FAM129BQ96TA1 746 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 TTC1Q99614 292 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 CDH19Q9H159 772 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 RSPH9Q9H1X1 276 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 CATSPERZQ9NTU4 200 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 KCNK4Q9NYG8 393 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 WSB2Q9NYS7 404 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-208ENST00000553868 PKD2L2Q9NZM6 624 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 FBXO5Q9UKT4 447 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 SLC30A1Q9Y6M5 507 aa14.36□□□□□ -0.11
SHMT2-208ENST00000553868 RGSL1A5PLK6 1076 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 H0Y8X5 98 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 CD3EAPO15446 510 aaKnown RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 PIAS1O75925 651 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 GOT2P00505 430 aaKnown RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 PSMD8P48556 350 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 POLD2P49005 469 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 ARSDP51689 593 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 LIMK2P53671 638 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 SFSWAPQ12872 951 aaKnown RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 NFATC3Q12968 1075 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 CDKN3Q16667 212 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 RNF187Q5TA31 235 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 LRRC66Q68CR7 880 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 ERN2Q76MJ5 926 aaKnown RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 DPPA4Q7L190 304 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 PARS2Q7L3T8 475 aaKnown RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 PTAR1Q7Z6K3 402 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 TRABD2AQ86V40 505 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 MMAAQ8IVH4 418 aaKnown RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 RAVER1Q8IY67 606 aaKnown RBP14.35□□□□□ -0.11
SHMT2-208ENST00000553868 SMC6Q96SB8 1091 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 TCF12Q99081 682 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 AGAP2Q99490 1192 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 RBBP8Q99708 897 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 HDAC8Q9BY41 377 aa14.35□□□□□ -0.11
SHMT2-208ENST00000553868 RHOJQ9H4E5 214 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms