RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 MLPHQ9BV36 600 aaPredicted RBP12.69□□□□□ -0.38
VPS29-211ENST00000553128 OR2AG1Q9H205 316 aa12.69□□□□□ -0.38
VPS29-211ENST00000553128 RMI1Q9H9A7 625 aa12.69□□□□□ -0.38
VPS29-211ENST00000553128 CWC15Q9P013 229 aaKnown RBP12.69□□□□□ -0.38
VPS29-211ENST00000553128 DNAJC16Q9Y2G8 782 aa12.69□□□□□ -0.38
VPS29-211ENST00000553128 ZG16O60844 167 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 ZNF30P17039 623 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 RPL10P27635 214 aaKnown RBP12.68□□□□□ -0.38
VPS29-211ENST00000553128 CA5AP35218 305 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 SOX5P35711 763 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 HSPA9P38646 679 aaKnown RBP12.68□□□□□ -0.38
VPS29-211ENST00000553128 CLCNKAP51800 687 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 ATP1A4Q13733 1029 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 ELOAQ14241 798 aaKnown RBP12.68□□□□□ -0.38
VPS29-211ENST00000553128 ZRSR2Q15696 482 aaKnown RBP12.68□□□□□ -0.38
VPS29-211ENST00000553128 ERMARDQ5T6L9 678 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 IZUMO3Q5VZ72 239 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 TRIM72Q6ZMU5 477 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 AVL9Q8NBF6 648 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 ZDHHC12Q96GR4 267 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 CARD9Q9H257 536 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 SLC40A1Q9NP59 571 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 NT5MQ9NPB1 228 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 FGF21Q9NSA1 209 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 SEMA5BQ9P283 1151 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 TRIM10Q9UDY6 481 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 EPHA6Q9UF33 1036 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 SNX7Q9UNH6 387 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 B3GNT3Q9Y2A9 372 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 POLEQ07864 2286 aa12.68□□□□□ -0.38
VPS29-211ENST00000553128 PDZK1P1A8MUH7 402 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 MASP2O00187 686 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 DDX3YO15523 660 aaKnown RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 CPNE3O75131 537 aaKnown RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 SCRG1O75711 98 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 PRLP01236 227 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 CAPN1P07384 714 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 IL4RP24394 825 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 MMP13P45452 471 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 SPINT3P49223 89 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 VAV2P52735 878 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 POLR2FP61218 127 aaKnown RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 GPR19Q15760 415 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 TDRD12Q587J7 1177 aaKnown RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 DCUN1D2Q6PH85 259 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 HPS6Q86YV9 775 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 ZNF514Q96K75 400 aaPredicted RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 FCRL4Q96PJ5 515 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 MAP3K3Q99759 626 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 TRIM7Q9C029 511 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 ZBTB20Q9HC78 741 aaPredicted RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 WASH6PQ9NQA3 447 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 TCFL5Q9UL49 500 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 CHKBQ9Y259 395 aa12.67□□□□□ -0.38
VPS29-211ENST00000553128 COPG1Q9Y678 874 aaKnown RBP12.67□□□□□ -0.38
VPS29-211ENST00000553128 DIDO1Q9BTC0 2240 aaKnown RBP12.66□□□□□ -0.38
VPS29-211ENST00000553128 ANKRD62A6NC57 917 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 PRSS44E7EML9 344 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 AMPD1P23109 780 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 PSMA2P25787 234 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 PDE1BQ01064 536 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 CAMK4Q16566 473 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 KYNUQ16719 465 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 INSCQ1MX18 579 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 ANO6Q4KMQ2 910 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 PLEKHS1Q5SXH7 462 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 ADGRG6Q86SQ4 1221 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 CUZD1Q86UP6 607 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 TMEM126BQ8IUX1 230 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 ZNF547Q8IVP9 402 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 TTC30BQ8N4P2 665 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 TMEM102Q8N9M5 508 aaPredicted RBP12.66□□□□□ -0.38
VPS29-211ENST00000553128 GPR150Q8NGU9 434 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 UBE2Q2Q8WVN8 375 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 EID2BQ96D98 161 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 RAB33BQ9H082 229 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 FAM83DQ9H4H8 585 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 POT1Q9NUX5 634 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 SEPT11Q9NVA2 429 aaKnown RBP12.66□□□□□ -0.38
VPS29-211ENST00000553128 ITGB1BP2Q9UKP3 347 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 OSGIN2Q9Y236 505 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 WDR37Q9Y2I8 494 aa12.66□□□□□ -0.38
VPS29-211ENST00000553128 C1orf232A0A0U1RR37 186 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 EIF3CLB5ME19 914 aaKnown RBP12.65□□□□□ -0.38
VPS29-211ENST00000553128 MEN1O00255 615 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 E2F3O00716 465 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 CHUKO15111 745 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
VPS29-211ENST00000553128 MTX2O75431 263 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 LCA5LO95447 670 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 JCHAINP01591 159 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 ZNF7P17097 686 aaPredicted RBP12.65□□□□□ -0.38
VPS29-211ENST00000553128 MIPP30301 263 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 GLRBP48167 497 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 EPHB1P54762 984 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 DSC2Q02487 901 aa12.65□□□□□ -0.38
VPS29-211ENST00000553128 ACY1Q03154 408 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms