RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	VDR	P11473	427 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	MYCLP1	P12525	358 aa	Predicted RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	MST1	P26927	711 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	MMP12	P39900	470 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	FOXL2	P58012	376 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PPP1CA	P62136	330 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SNRPF	P62306	86 aa	Known RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SNRPD1	P62314	119 aa	Known RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	HMGN5	P82970	282 aa	Known RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SLC20A2	Q08357	652 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ELP6	Q0PNE2	266 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	RALGDS	Q12967	914 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NME3	Q13232	169 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TUBB3	Q13509	450 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	C3AR1	Q16581	482 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	KNOP1	Q1ED39	458 aa	Known RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	EXOSC6	Q5RKV6	272 aa	Known RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	MTFR2	Q6P444	385 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	FDX2	Q6P4F2	183 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	LCLAT1	Q6UWP7	414 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	MRGPRE	Q86SM8	312 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PLXDC1	Q8IUK5	500 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	FAM20C	Q8IXL6	584 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DRC7	Q8IY82	874 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	BCORP1	Q8N888	145 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CATSPER1	Q8NEC5	780 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PPP4R1	Q8TF05	950 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ARHGEF2	Q92974	986 aa	Known RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ISG20	Q96AZ6	181 aa	Known RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	EXOC2	Q96KP1	924 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TAAR6	Q96RI8	345 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PDE7B	Q9NP56	450 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ST7	Q9NRC1	585 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ZNF212	Q9UDV6	495 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	RARRES3	Q9UL19	164 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TMEM98	Q9Y2Y6	226 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ARID1A	O14497	2285 aa		5.81	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ILVBL	A1L0T0	632 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	HMX2	A2RU54	273 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TRIM49B	A6NDI0	452 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	EPB41L2	O43491	1005 aa	Known RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	EIF4EBP3	O60516	100 aa	Predicted RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GRAP2	O75791	330 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SLCO2B1	O94956	709 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SIX3	O95343	332 aa	Predicted RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	EBLN1	P0CF75	366 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TFE3	P19532	575 aa	Predicted RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	AGA	P20933	346 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SMS	P52788	366 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PDE1B	Q01064	536 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GNA12	Q03113	381 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	POLD3	Q15054	466 aa	Predicted RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PRKD1	Q15139	912 aa	Predicted RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	UGP2	Q16851	508 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	LONRF1	Q17RB8	773 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CACHD1	Q5VU97	1274 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NXPE4	Q6UWF7	544 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	FAM198B	Q6UWH4	519 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	LIPI	Q6XZB0	460 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	MARK2	Q7KZI7	788 aa	Known RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TRIM74	Q86UV6	250 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TRIM42	Q8IWZ5	723 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DEFB106A	Q8N104	65 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CIART	Q8N365	385 aa	Predicted RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	KLHL6	Q8WZ60	621 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TM9SF4	Q92544	642 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NR4A3	Q92570	626 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	HSFY1	Q96LI6	401 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NT5C1B	Q96P26	610 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	OR2M4	Q96R27	311 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ZNF559	Q9BR84	538 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	C7orf69	Q9H7B7	122 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	POPDC2	Q9HBU9	364 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SARS2	Q9NP81	518 aa	Known RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	WASH6P	Q9NQA3	447 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PHPT1	Q9NRX4	125 aa	Predicted RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	STOML1	Q9UBI4	398 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TBC1D29	Q9UFV1	150 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ZNHIT2	Q9UHR6	403 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	FBXO2	Q9UK22	296 aa	Predicted RBP	5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PRKAB1	Q9Y478	270 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ANK2	Q01484	3957 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	HEATR5A	Q86XA9	2040 aa		5.8	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DNAJC13	O75165	2243 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IGHV5-51	A0A0C4DH38	117 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GOLGA6C	A6NDK9	693 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GOLGA6B	A6NDN3	693 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DRGX	A6NNA5	263 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260		E5RJQ4	531 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ZNHIT1	O43257	154 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SART1	O43290	800 aa	Known RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SNX2	O60749	519 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SRGAP2	O75044	1071 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SCRG1	O75711	98 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IPO13	O94829	963 aa	Known RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NR3C1	P04150	777 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IVL	P07476	585 aa		5.79	□□□□□ -1.48

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