RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ESCO2Q56NI9 601 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 ERMARDQ5T6L9 678 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 CLEC17AQ6ZS10 378 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 SLFN11Q7Z7L1 901 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 NOXA1Q86UR1 476 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 CAMK1DQ8IU85 385 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 DENND6AQ8IWF6 608 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 RNF168Q8IYW5 571 aaPredicted RBP5.39□□□□□ -1.55
CPSF6-206ENST00000550987 ZBTB2Q8N680 514 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 MCPH1Q8NEM0 835 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 VPS33AQ96AX1 596 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 PTERQ96BW5 349 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 PGAP3Q96FM1 320 aaPredicted RBP5.39□□□□□ -1.55
CPSF6-206ENST00000550987 GAD1Q99259 594 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 CCDC106Q9BWC9 280 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 C1QTNF5Q9BXJ0 243 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 MVB12BQ9H7P6 319 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 PSD3Q9NYI0 1048 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 INSL6Q9Y581 213 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 SPG11Q96JI7 2443 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 A0A087X1B8 175 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 KIR2DS5A0A0G2JLQ3 304 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 TMEM221A6NGB7 291 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 KIR2DS3K7RE56 304 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 M0R296 226 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 CHL1O00533 1208 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 JRKO75564 520 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 WNT1P04628 370 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 HIST1H2ABP04908 130 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 VDRP11473 427 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 SCG2P13521 617 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 HIST1H2ADP20671 130 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 TNFSF8P32971 234 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 PRCPP42785 496 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 PPP5CP53041 499 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 CXCL9Q07325 125 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 SOWAHAQ2M3V2 549 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 PCGF3Q3KNV8 242 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 MIDNQ504T8 468 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 FBLN7Q53RD9 439 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 OLFML1Q6UWY5 402 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 SEPT14Q6ZU15 432 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 HIST3H2AQ7L7L0 130 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 HACE1Q8IYU2 909 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 ZBTB8BQ8NAP8 495 aaPredicted RBP5.38□□□□□ -1.55
CPSF6-206ENST00000550987 C8orf58Q8NAV2 365 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 HJURPQ8NCD3 748 aaPredicted RBP5.38□□□□□ -1.55
CPSF6-206ENST00000550987 BEST2Q8NFU1 509 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 OR6J1Q8NGC5 347 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 OR8K5Q8NH50 307 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 CEP76Q8TAP6 659 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 TMCO6Q96DC7 493 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 GBP5Q96PP8 586 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 SLITRK1Q96PX8 696 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 NUDCD1Q96RS6 583 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 SEPT5Q99719 369 aaPredicted RBP5.38□□□□□ -1.55
CPSF6-206ENST00000550987 FAM118BQ9BPY3 351 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 SH2D3AQ9BRG2 576 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 MRPL1Q9BYD6 325 aaKnown RBP5.38□□□□□ -1.55
CPSF6-206ENST00000550987 GPR108Q9NPR9 543 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 PFDN4Q9NQP4 134 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 ANKRD10Q9NXR5 420 aa5.38□□□□□ -1.55
CPSF6-206ENST00000550987 CWC15Q9P013 229 aaKnown RBP5.38□□□□□ -1.55
CPSF6-206ENST00000550987 ARPP21Q9UBL0 812 aaPredicted RBP5.38□□□□□ -1.55
CPSF6-206ENST00000550987 KAT6AQ92794 2004 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 C1orf226A1L170 272 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 STMND1H3BQB6 276 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 ADAMDEC1O15204 470 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 IPO8O15397 1037 aaKnown RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 DIAPH2O60879 1101 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 TPOP07202 933 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 MMP2P08253 660 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 QDPRP09417 244 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 IL9P15248 144 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 ANXA7P20073 488 aaKnown RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 AGAP20933 346 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 MSH2P43246 934 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 RPS13P62277 151 aaKnown RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 PPARDQ03181 441 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 BAATQ14032 418 aaPredicted RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 LPIN1Q14693 890 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 C6orf10Q5SRN2 563 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 LRIF1Q5T3J3 769 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 KIAA1614Q5VZ46 1190 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 PMS2CLQ68D20 193 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 HEPHL1Q6MZM0 1159 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 ZNF793Q6ZN11 406 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 CHST3Q7LGC8 479 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 TDRD5Q8NAT2 981 aaKnown RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 SECISBP2LQ93073 1101 aaKnown RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 RRNAD1Q96FB5 475 aaKnown RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 SIPA1Q96FS4 1042 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 ZFYVE19Q96K21 471 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 B3GNT4Q9C0J1 378 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 SEMA4GQ9NTN9 838 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 AMACRQ9UHK6 382 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 ANAPC5Q9UJX4 755 aa5.37□□□□□ -1.55
CPSF6-206ENST00000550987 HS3ST3A1Q9Y663 406 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms