RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PANX2Q96RD6 677 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 FSD1LQ9BXM9 530 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 OSGEPL1Q9H4B0 414 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 POT1Q9NUX5 634 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 SAE1Q9UBE0 346 aaPredicted RBP10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 AAR2Q9Y312 384 aaKnown RBP10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 PKP3Q9Y446 797 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 HYOU1Q9Y4L1 999 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 SHROOM3Q8TF72 1996 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 KIF26BQ2KJY2 2108 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 COL27A1Q8IZC6 1860 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 PDZK1P1A8MUH7 402 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 AGRPO00253 132 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 STK10O94804 968 aaKnown RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 EML2O95834 649 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 SLC4A1P02730 911 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 ANKRD34CP0C6C1 535 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 PIRTP0C851 137 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 PECAM1P16284 738 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 NFKB1P19838 968 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 MPSTP25325 297 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 CD68P34810 354 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 SPAM1P38567 509 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 HALP42357 657 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 GEMP55040 296 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 UBE2IP63279 158 aaKnown RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 PDE1BQ01064 536 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 TMEM115Q12893 351 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 PRPSAP1Q14558 356 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 SLC1A5Q15758 541 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 KDELC1Q6UW63 502 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 TMEM26Q6ZUK4 368 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZC3H18Q86VM9 953 aaKnown RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF567Q8N184 647 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 TXLNBQ8N3L3 684 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 BEND7Q8N7W2 519 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 NKD1Q969G9 470 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 KIAA1143Q96AT1 154 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 HAUS1Q96CS2 278 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF514Q96K75 400 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 MRGPRX2Q96LB1 330 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 QKIQ96PU8 341 aaKnown RBP eCLIP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 C19orf43Q9BQ61 176 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 IL26Q9NPH9 171 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 PRDM8Q9NQV8 689 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 UBP1Q9NZI7 540 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 PCDHGA4Q9Y5G9 962 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 PCYT1BQ9Y5K3 369 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 B3GALT1Q9Y5Z6 326 aa10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 EPN1Q9Y6I3 576 aaPredicted RBP10.72□□□□□ -0.69
VTI1BP3-201ENST00000550220 GLYATL1P3A0A0U1RQE8 302 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 CCDC66A2RUB6 948 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 C5orf60A6NFR6 353 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 COL6A6A6NMZ7 2263 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 C2orf81A6NN90 581 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 A8MU76 341 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 H7C0C1 242 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 POLR1CO15160 346 aaPredicted RBP10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 UBXN7O94888 489 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 PYGMP11217 842 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 PLA2G2AP14555 144 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 AMD1P17707 334 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 CTNNA2P26232 953 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 UGT1A3P35503 534 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 MAPK9P45984 424 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 ATP5OP48047 213 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 NAP1L1P55209 391 aaKnown RBP10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 LY6DQ14210 128 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 ATP13A5Q4VNC0 1218 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 SIRPB2Q5JXA9 342 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 SNAP47Q5SQN1 464 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 ANKS6Q68DC2 871 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 KLHL35Q6PF15 583 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 CRTC3Q6UUV7 619 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 GLT6D1Q7Z4J2 308 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 AMZ2Q86W34 360 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF761Q86XN6 746 aaPredicted RBP10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 CDKL3Q8IVW4 592 aaPredicted RBP10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 CACNA2D3Q8IZS8 1091 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 NLGN4XQ8N0W4 816 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 BMPERQ8N8U9 685 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 IPMKQ8NFU5 416 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 NLGN4YQ8NFZ3 816 aaPredicted RBP10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZDHHC12Q96GR4 267 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 MRFAP1L1Q96HT8 127 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 CATSPER2Q96P56 530 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 BPIFA1Q9NP55 256 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 OCIAD1Q9NX40 245 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 IL17CQ9P0M4 197 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 TMEM9Q9P0T7 183 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 RSPH14Q9UHP6 348 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 PCDHA3Q9Y5H8 950 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 SPO11Q9Y5K1 396 aa10.71□□□□□ -0.69
VTI1BP3-201ENST00000550220 MN1Q10571 1320 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 PRR19A6NJB7 356 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 BTNL10A8MVZ5 291 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 J3QKU1 62 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 AURKAO14965 403 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 STX7O15400 261 aaKnown RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 RAD1O60671 282 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms