RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CSF2RBP32927 897 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 CD68P34810 354 aaPredicted RBP13.29□□□□□ -0.28
NUP188-211ENST00000550219 STC1P52823 247 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 DPTQ07507 201 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 PEX6Q13608 980 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 DHX34Q14147 1143 aaKnown RBP13.29□□□□□ -0.28
NUP188-211ENST00000550219 C17orf82Q86X59 251 aaPredicted RBP13.29□□□□□ -0.28
NUP188-211ENST00000550219 KLHL7Q8IXQ5 586 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 ZNF567Q8N184 647 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 CBARPQ8N350 705 aaPredicted RBP13.29□□□□□ -0.28
NUP188-211ENST00000550219 PMEPA1Q969W9 287 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 MED8Q96G25 268 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 KRT12Q99456 494 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 ARHGAP9Q9BRR9 750 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 PCDH9Q9HC56 1237 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 PPIL1Q9Y3C6 166 aa13.29□□□□□ -0.28
NUP188-211ENST00000550219 IGHV1OR21-1A0A087WYE8 117 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 PPM1DO15297 605 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 STK10O94804 968 aaKnown RBP13.28□□□□□ -0.28
NUP188-211ENST00000550219 CLDN7O95471 211 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 CD1CP29017 333 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 PTSQ03393 145 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 NIPAL4Q0D2K0 466 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 GALNT3Q14435 633 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 IHHQ14623 411 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 NR1D2Q14995 579 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 PYCR3Q53H96 274 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 ANKRD20A2Q5SQ80 823 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 FAM182AQ5T1J6 154 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 ANKRD20A1Q5TYW2 823 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 TMEM164Q5U3C3 297 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 ANKRD20A3Q5VUR7 823 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 ZNF574Q6ZN55 896 aaPredicted RBP13.28□□□□□ -0.28
NUP188-211ENST00000550219 SYDE1Q6ZW31 735 aaPredicted RBP13.28□□□□□ -0.28
NUP188-211ENST00000550219 ZNF765Q7L2R6 523 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 PRICKLE2Q7Z3G6 844 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 KLHDC8BQ8IXV7 354 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 GLIS1Q8NBF1 620 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 NOA1Q8NC60 698 aaKnown RBP13.28□□□□□ -0.28
NUP188-211ENST00000550219 CCDC110Q8TBZ0 833 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 SLC37A2Q8TED4 501 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 EXTL1Q92935 676 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 SGF29Q96ES7 293 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 AHCYL2Q96HN2 611 aaKnown RBP13.28□□□□□ -0.28
NUP188-211ENST00000550219 CEP41Q9BYV8 373 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 TMEM9Q9P0T7 183 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 KLHL8Q9P2G9 620 aaPredicted RBP13.28□□□□□ -0.28
NUP188-211ENST00000550219 ZNHIT2Q9UHR6 403 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 PCDHGA4Q9Y5G9 962 aa13.28□□□□□ -0.28
NUP188-211ENST00000550219 OAS3Q9Y6K5 1087 aaKnown RBP13.28□□□□□ -0.28
NUP188-211ENST00000550219 GCN1Q92616 2671 aaKnown RBP13.27□□□□□ -0.28
NUP188-211ENST00000550219 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.27□□□□□ -0.29
NUP188-211ENST00000550219 FAM187AA6NFU0 413 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 HGSO14964 777 aaPredicted RBP13.27□□□□□ -0.29
NUP188-211ENST00000550219 SLC28A2O43868 658 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 IFNB1P01574 187 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 PYGLP06737 847 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 ACP5P13686 325 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 ETS1P14921 441 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 CES1P23141 567 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 CSTF2P33240 577 aaKnown RBP eCLIP13.27□□□□□ -0.29
NUP188-211ENST00000550219 RPL22P35268 128 aaKnown RBP13.27□□□□□ -0.29
NUP188-211ENST00000550219 CD86P42081 329 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 MAPK9P45984 424 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 GPR3P46089 330 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 CYP4F2P78329 520 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 DR1Q01658 176 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 NFATC3Q12968 1075 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 SNAP47Q5SQN1 464 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 ALS2CLQ60I27 953 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 C4orf22Q6V702 233 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 CHST15Q7LFX5 561 aaPredicted RBP13.27□□□□□ -0.29
NUP188-211ENST00000550219 GSTA5Q7RTV2 222 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 PID1Q7Z2X4 250 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 PRUNE1Q86TP1 453 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 FAM129CQ86XR2 697 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 CCDC89Q8N998 374 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 ZSCAN1Q8NBB4 408 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 ARRDC2Q8TBH0 407 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 TADA1Q96BN2 335 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 AGAP3Q96P47 875 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 FCRL5Q96RD9 977 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 SLC38A3Q99624 504 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 SLC25A51Q9H1U9 297 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 GLOD4Q9HC38 313 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 PKD2L2Q9NZM6 624 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 PAK5Q9P286 719 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 KCNK6Q9Y257 313 aa13.27□□□□□ -0.29
NUP188-211ENST00000550219 PCYT1BQ9Y5K3 369 aaPredicted RBP13.27□□□□□ -0.29
NUP188-211ENST00000550219 FADS2P1A8MWK0 482 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 B8ZZF3 427 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
NUP188-211ENST00000550219 STMND1H3BQB6 276 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 RAD51CO43502 376 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 DUX1O43812 170 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 SNX2O60749 519 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 EML2O95834 649 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 GAS8O95995 478 aa13.26□□□□□ -0.29
NUP188-211ENST00000550219 PRLP01236 227 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms