RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.49	□□□□□ -0.57
CNOT2-223	ENST00000550160	VWA7	Q9Y334	891 aa		11.49	□□□□□ -0.57
CNOT2-223	ENST00000550160	TECTA	O75443	2155 aa		11.49	□□□□□ -0.57
CNOT2-223	ENST00000550160	XIRP2	A4UGR9	3374 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160		A0A1W2PPC4	97 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160		A6NNZ2	444 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	METTL12	A8MUP2	240 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	GPR89A	B7ZAQ6	455 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160		K7ESM1	405 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	TPP1	O14773	563 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	KPNA5	O15131	536 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	MAGEC1	O60732	1142 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	MTX2	O75431	263 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	SYF2	O95926	243 aa	Known RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	ALDOA	P04075	364 aa	Known RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	IGHV4-34	P06331	123 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	F7	P08709	466 aa	Predicted RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	GSTM1	P09488	218 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	GPR89B	P0CG08	455 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	KRT4	P19013	534 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	CHRM3	P20309	590 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	CD9	P21926	228 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	FNTB	P49356	437 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	MAGOH	P61326	146 aa	Known RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	GSTM4	Q03013	218 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	TMEM115	Q12893	351 aa	Predicted RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	TTMP	Q5BVD1	217 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	TNFAIP8L3	Q5GJ75	292 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	RBM20	Q5T481	1227 aa	Known RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	KCTD16	Q68DU8	428 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	LCA5	Q86VQ0	697 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	MZB1	Q8WU39	189 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	ISL2	Q96A47	359 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	ARL8A	Q96BM9	186 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	BIRC7	Q96CA5	298 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	TLCD1	Q96CP7	247 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	SERAC1	Q96JX3	654 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	BIRC8	Q96P09	236 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	KLF6	Q99612	283 aa	Predicted RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	MYOC	Q99972	504 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	APOO	Q9BUR5	198 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	BOC	Q9BWV1	1114 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	EPHX3	Q9H6B9	360 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	SYTL2	Q9HCH5	934 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	GPAM	Q9HCL2	828 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	FZD3	Q9NPG1	666 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	TRMT6	Q9UJA5	497 aa	Known RBP	11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	TMPRSS11E	Q9UL52	423 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160	HS3ST3A1	Q9Y663	406 aa		11.48	□□□□□ -0.57
CNOT2-223	ENST00000550160		A0A087X1B8	175 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160		A0A1W2PPM1	405 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	HMX2	A2RU54	273 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	KLHL33	A6NCF5	533 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	COPE	O14579	308 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	RAD51B	O15315	384 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	TRIM16	O95361	564 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	HOXC4	P09017	264 aa	Predicted RBP	11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	FDXR	P22570	491 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	CD27	P26842	260 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	RABIF	P47224	123 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	CCT5	P48643	541 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	KPNA2	P52292	529 aa	Known RBP	11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	THOP1	P52888	689 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	TAS2R39	P59534	338 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	KIAA1024L	P59773	190 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	YPEL5	P62699	121 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	B4GALNT1	Q00973	533 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	TTLL9	Q3SXZ7	439 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	WDR45B	Q5MNZ6	344 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	CTSL3P	Q5NE16	218 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	KLC3	Q6P597	504 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	ZNF549	Q6P9A3	640 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	TSSK4	Q6SA08	328 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	KYAT3	Q6YP21	454 aa	Known RBP	11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	LPCAT2	Q7L5N7	544 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	DET1	Q7L5Y6	550 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	TRIM74	Q86UV6	250 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	TRAPPC5	Q8IUR0	188 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	PELI3	Q8N2H9	469 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	CLDN19	Q8N6F1	224 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	ARFGAP2	Q8N6H7	521 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	PNPLA1	Q8N8W4	532 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	COX14	Q96I36	57 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	HSPA12B	Q96MM6	686 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	OR2AG1	Q9H205	316 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	VPS11	Q9H270	941 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	RMI1	Q9H9A7	625 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	CAB39L	Q9H9S4	337 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	SSU72	Q9NP77	194 aa	Known RBP	11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	AASDHPPT	Q9NRN7	309 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	PCMTD2	Q9NV79	361 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	CNOT6	Q9ULM6	557 aa	Known RBP	11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	SMG5	Q9UPR3	1016 aa	Known RBP	11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	INVS	Q9Y283	1065 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	ANKRD6	Q9Y2G4	727 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	ACOT9	Q9Y305	439 aa		11.47	□□□□□ -0.57
CNOT2-223	ENST00000550160	OR1A2	Q9Y585	309 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms