RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 TIMM29Q9BSF4 260 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 ASPSCR1Q9BZE9 553 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 LACRTQ9GZZ8 138 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 ZMYND15Q9H091 742 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 GBA3Q9H227 469 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 UCK1Q9HA47 277 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 IL26Q9NPH9 171 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 KLC4Q9NSK0 619 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 IL17CQ9P0M4 197 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 PDP2Q9P2J9 529 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 CPNE7Q9UBL6 633 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 AMFRQ9UKV5 643 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 PCDHGA3Q9Y5H0 932 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 SPO11Q9Y5K1 396 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 DNMT3AQ9Y6K1 912 aaPredicted RBP11.24□□□□□ -0.61
BEST3-209ENST00000548658 ZFC3H1O60293 1989 aaKnown RBP11.24□□□□□ -0.61
BEST3-209ENST00000548658 BPTFQ12830 3046 aa11.24□□□□□ -0.61
BEST3-209ENST00000548658 GLYATL1P3A0A0U1RQE8 302 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 C5orf60A6NFR6 353 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 C2orf81A6NN90 581 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 K7ENP7 123 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 STX7O15400 261 aaKnown RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 THRAP10827 490 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 HOXB3P14651 431 aaPredicted RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 ZNF7P17097 686 aaPredicted RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 ITIH1P19827 911 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 CDC25BP30305 580 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 MAPK10P53779 464 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 RAB15P59190 212 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 CLN3Q13286 438 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 C16orf72Q14CZ0 275 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 ATP13A5Q4VNC0 1218 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 ANKRD20A2Q5SQ80 823 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 LDLRAP1Q5SW96 308 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 ARHGAP40Q5TG30 622 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 ANKRD20A1Q5TYW2 823 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 ANKRD20A3Q5VUR7 823 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 NKAIN2Q5VXU1 208 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 DARS2Q6PI48 645 aaKnown RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 INO80CQ6PI98 192 aaPredicted RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 WASH2PQ6VEQ5 465 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 RANBP10Q6VN20 620 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 RBM12BQ8IXT5 1001 aaKnown RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 LRRC57Q8N9N7 239 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 USP7Q93009 1102 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 ZNF514Q96K75 400 aaPredicted RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 CCDC74BQ96LY2 380 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 C19orf43Q9BQ61 176 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 OSGEPL1Q9H4B0 414 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 CPNE5Q9HCH3 593 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 BPIFA1Q9NP55 256 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 WASH6PQ9NQA3 447 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 FEZ2Q9UHY8 353 aaPredicted RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 REXO2Q9Y3B8 237 aaKnown RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 PCYT1BQ9Y5K3 369 aaPredicted RBP11.23□□□□□ -0.61
BEST3-209ENST00000548658 ITPR1Q14643 2758 aa11.23□□□□□ -0.61
BEST3-209ENST00000548658 PRAMEF33A0A0G2JMD5 474 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 GRID2IPA4D2P6 1211 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 KLHL33A6NCF5 533 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 LILRA5A6NI73 299 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 PDZK1P1A8MUH7 402 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 B4E171 279 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.22□□□□□ -0.61
BEST3-209ENST00000548658 STMND1H3BQB6 276 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 KCNN4O15554 427 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 PRAMEF10O60809 474 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 CRTAMO95727 393 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 EML2O95834 649 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 VIPP01282 170 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 PYGMP11217 842 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 LPOP22079 712 aaPredicted RBP11.22□□□□□ -0.61
BEST3-209ENST00000548658 TSPAN7P41732 249 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 HALP42357 657 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 CHRNA4P43681 627 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 NFATC2Q13469 925 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 TAF1AQ15573 450 aaPredicted RBP11.22□□□□□ -0.61
BEST3-209ENST00000548658 TAF1BQ53T94 588 aaPredicted RBP11.22□□□□□ -0.61
BEST3-209ENST00000548658 FAM182AQ5T1J6 154 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 ZNF648Q5T619 568 aaPredicted RBP11.22□□□□□ -0.61
BEST3-209ENST00000548658 AGAP9Q5VTM2 703 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 CRTC3Q6UUV7 619 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 ABRAXAS1Q6UWZ7 409 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 GAS2L3Q86XJ1 694 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 PLXDC1Q8IUK5 500 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 TRAPPC5Q8IUR0 188 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 TRIM48Q8IWZ4 208 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 TTC30BQ8N4P2 665 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 RNF10Q8N5U6 811 aaKnown RBP11.22□□□□□ -0.61
BEST3-209ENST00000548658 BEND7Q8N7W2 519 aaPredicted RBP11.22□□□□□ -0.61
BEST3-209ENST00000548658 ZSCAN1Q8NBB4 408 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 RCBTB1Q8NDN9 531 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 ACRBPQ8NEB7 543 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 ALG3Q92685 438 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 SPATA13Q96N96 652 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 TEFMQ96QE5 360 aaKnown RBP11.22□□□□□ -0.61
BEST3-209ENST00000548658 DDA1Q9BW61 102 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 ARFGAP3Q9NP61 516 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 PRDM8Q9NQV8 689 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 POT1Q9NUX5 634 aa11.22□□□□□ -0.61
BEST3-209ENST00000548658 SMOXQ9NWM0 555 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms