RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FRG2Q64ET8 278 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 KBTBD6Q86V97 674 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 OR8K5Q8NH50 307 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 OIT3Q8WWZ8 545 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 ADAMTS14Q8WXS8 1223 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 APBB2Q92870 758 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 VOPP1Q96AW1 172 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 RHBDF1Q96CC6 855 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 CEP295NLQ96MC4 621 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 DACH2Q96NX9 599 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 SLC25A33Q9BSK2 321 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 MRPL1Q9BYD6 325 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 TXLNGYQ9BZA5 131 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 HRH4Q9H3N8 390 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 PIGMQ9H3S5 423 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 SEBOXQ9HB31 216 aaPredicted RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 EPB41L5Q9HCM4 733 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 MRPL15Q9P015 296 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 TTC7AQ9ULT0 858 aaPredicted RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 R3HDM2Q9Y2K5 976 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 PAM16Q9Y3D7 125 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 TMEM184BQ9Y519 407 aaPredicted RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 INSL5Q9Y5Q6 135 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 ZNF521Q96K83 1311 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 PARD3Q8TEW0 1356 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 TECPR2O15040 1411 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 RRBP1Q9P2E9 1410 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 NEXMIFQ5QGS0 1516 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 NHSL1Q5SYE7 1610 aa4.09□□□□□ -1.76
PTCH1-216ENST00000548379 IQGAP3Q86VI3 1631 aa4.09□□□□□ -1.76
PTCH1-216ENST00000548379 A0A0U1RQJ8 604 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 KANSL1LA0AUZ9 987 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 SYNDIG1LA6NDD5 238 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 M0QZ24 198 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 PLRG1O43660 514 aaKnown RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 CH25HO95992 272 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 DNTTP04053 509 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 KRT20P35900 424 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 APOBEC1P41238 236 aaKnown RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 SUOXP51687 545 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 HNRNPH2P55795 449 aaKnown RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 ECT2LQ008S8 904 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 BNC1Q01954 994 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 C15orf59Q2T9L4 293 aaPredicted RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 AMZ1Q400G9 498 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 MFSD4BQ5TF39 518 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 CDC42BPGQ6DT37 1551 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 ZNF280DQ6N043 979 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 NAA16Q6N069 864 aaPredicted RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 RPUSD3Q6P087 351 aaKnown RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 PDXDC1Q6P996 788 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 SDCCAG8Q86SQ7 713 aaPredicted RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 EPHX4Q8IUS5 362 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 GRAMD2BQ96HH9 432 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 GAD1Q99259 594 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 ATXN2Q99700 1313 aaKnown RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 YTHDC2Q9H6S0 1430 aaKnown RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 TRMT1Q9NXH9 659 aaKnown RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 CACNA1IQ9P0X4 2223 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 OR14J1Q9UGF5 321 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 PLEKHH1Q9ULM0 1364 aa4.08□□□□□ -1.76
PTCH1-216ENST00000548379 PTRH2Q9Y3E5 179 aaKnown RBP4.08□□□□□ -1.76
PTCH1-216ENST00000548379 E9PCH4 1651 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 ANKARQ7Z5J8 1434 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 LNP1A1A4G5 178 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GOLGA6L9A6NEM1 432 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 INO80B-WBP1J3KQ70 363 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 UBE2CO00762 179 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GAGE7O76087 117 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GAGE12FP0CL80 117 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GAGE12GP0CL81 117 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GAGE12IP0CL82 117 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 IGHV4-30-4P0DP06 118 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 MMP9P14780 707 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 PRLRP16471 622 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 SAT1P21673 171 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 STX2P32856 288 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 RRP1P56182 461 aaKnown RBP4.07□□□□□ -1.76
PTCH1-216ENST00000548379 CSNK2A1P68400 391 aaPredicted RBP4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GAGE1Q13065 139 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GAGE4Q13068 117 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 TRAF3Q13114 568 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GRAPQ13588 217 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 KCNC3Q14003 757 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 EFHC1Q5JVL4 640 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 NSUN5P2Q63ZY6 315 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 GPR139Q6DWJ6 353 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 TYW3Q6IPR3 259 aaKnown RBP4.07□□□□□ -1.76
PTCH1-216ENST00000548379 SLC30A6Q6NXT4 461 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 KCTD18Q6PI47 426 aaPredicted RBP4.07□□□□□ -1.76
PTCH1-216ENST00000548379 TMCO3Q6UWJ1 677 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 ATG9AQ7Z3C6 839 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 AACSQ86V21 672 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 DNAAF5Q86Y56 855 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 ARID3BQ8IVW6 561 aaPredicted RBP4.07□□□□□ -1.76
PTCH1-216ENST00000548379 SCYL3Q8IZE3 742 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 CLIP4Q8N3C7 705 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 CSNK2A3Q8NEV1 391 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 OR1J2Q8NGS2 313 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 PTPMT1Q8WUK0 201 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms