RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 POLR1BQ9H9Y6 1135 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 NLE1Q9NVX2 485 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-226ENST00000547259 IL17CQ9P0M4 197 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 ZC3H7BQ9UGR2 993 aaKnown RBP11.98□□□□□ -0.49
HDAC7-226ENST00000547259 FKBPLQ9UIM3 349 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 TEX264Q9Y6I9 313 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 RPS6KL1Q9Y6S9 549 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 PIEZO2Q9H5I5 2752 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 SPTA1P02549 2419 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 RP1P56715 2156 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 FAM237BA0A1B0GVD1 139 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 RGSL1A5PLK6 1076 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 CCL22O00626 93 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 TPP1O14773 563 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 FFAR2O15552 330 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 CTIFO43310 598 aaKnown RBP11.97□□□□□ -0.49
HDAC7-226ENST00000547259 RECQL5O94762 991 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-226ENST00000547259 USP1O94782 785 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 TTC4O95801 387 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 FAM153BP0C7A2 387 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 BPIP17213 487 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 GM2AP17900 193 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 PAMP19021 973 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 SPAM1P38567 509 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 HADHAP40939 763 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 MLLT3P42568 568 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-226ENST00000547259 SPINT3P49223 89 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 RPIAP49247 311 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 CXADRP78310 365 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 PRAMEP78395 509 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 CFHR1Q03591 330 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 CBLBQ13191 982 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 SLMAPQ14BN4 828 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 FAM153CQ494X1 144 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 TAF1BQ53T94 588 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-226ENST00000547259 SPANXN3Q5MJ09 141 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 ZDHHC20Q5W0Z9 365 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 ZCCHC8Q6NZY4 707 aaKnown RBP11.97□□□□□ -0.49
HDAC7-226ENST00000547259 CES3Q6UWW8 571 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 KYAT3Q6YP21 454 aaKnown RBP11.97□□□□□ -0.49
HDAC7-226ENST00000547259 CAPN12Q6ZSI9 719 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 Q6ZSR6 202 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 Q6ZVL8 140 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 IGDCC3Q8IVU1 814 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 PALM2Q8IXS6 379 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 RAVER1Q8IY67 606 aaKnown RBP11.97□□□□□ -0.49
HDAC7-226ENST00000547259 NRSN1Q8IZ57 195 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 OR13H1Q8NG92 308 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 OR13J1Q8NGT2 312 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 ASB12Q8WXK4 309 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 PEX13Q92968 403 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 MFSD3Q96ES6 412 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 APOLD1Q96LR9 279 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 ZNF778Q96MU6 729 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 C1QTNF7Q9BXJ2 289 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 SLC17A9Q9BYT1 436 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 TREX1Q9NSU2 369 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 DNAJC28Q9NX36 388 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 KCTD5Q9NXV2 234 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 SLC2A6Q9UGQ3 507 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 RAB21Q9UL25 225 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 RIMKLBQ9ULI2 386 aa11.97□□□□□ -0.49
HDAC7-226ENST00000547259 GLYATL1P3A0A0U1RQE8 302 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 FPGTO14772 594 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 TCEA3O75764 348 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 CSF2P04141 144 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 RBMS1P29558 406 aaKnown RBP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 MC4RP32245 332 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 DCDC1P59894 354 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 GABREP78334 506 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 ACVR1Q04771 509 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 PTK2BQ14289 1009 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 CRYMQ14894 314 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 MAP9Q49MG5 647 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 ANKRD20A4Q4UJ75 823 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 KIAA0930Q6ICG6 404 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 ESRP1Q6NXG1 681 aaKnown RBP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 AFTPHQ6ULP2 937 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 FAM151BQ6UXP7 276 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 UNC5AQ6ZN44 842 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 RFLNAQ6ZTI6 216 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 ZNF765Q7L2R6 523 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 PTAR1Q7Z6K3 402 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 TECPR1Q7Z6L1 1165 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 TMEM135Q86UB9 458 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 PARGQ86W56 976 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 CBARPQ8N350 705 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 OTUD6BQ8N6M0 293 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 GPR26Q8NDV2 337 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 MAPK15Q8TD08 544 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 KCNE4Q8WWG9 221 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 AP2M1Q96CW1 435 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 HIC2Q96JB3 615 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 TBATAQ96M53 351 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 TTC25Q96NG3 672 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 LENG8Q96PV6 779 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-226ENST00000547259 PLEKHG4BQ96PX9 1271 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 MYOCQ99972 504 aa11.96□□□□□ -0.49
HDAC7-226ENST00000547259 C19orf43Q9BQ61 176 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms