RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CHD6Q8TD26 2715 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 A0A087WV48 116 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 AGAP14A8MT82 685 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 B4GAT1O43505 415 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 LDB2O43679 373 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 TLX3O43711 291 aaPredicted RBP15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A9O60656 530 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 SNX2O60749 519 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 SRP72O76094 671 aaKnown RBP15.66■□□□□ 0.1
DDX54-204ENST00000546898 FGGP02679 453 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A6P19224 532 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A1P22309 533 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A4P22310 534 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 ALDH4A1P30038 563 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A3P35503 534 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A5P35504 534 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 OR1D5P58170 312 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 XIAPP98170 497 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 HHEXQ03014 270 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 ZFP36L1Q07352 338 aaKnown RBP15.66■□□□□ 0.1
DDX54-204ENST00000546898 PTPRCAPQ14761 206 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 PLA2G4EQ3MJ16 856 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 C11orf96Q7Z7L8 435 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 B3GNT8Q7Z7M8 397 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 PIM3Q86V86 326 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 SLITRK4Q8IW52 837 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 CCDC89Q8N998 374 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 OR13C4Q8NGS5 318 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 ANP32BQ92688 251 aaKnown RBP15.66■□□□□ 0.1
DDX54-204ENST00000546898 TMEM159Q96B96 161 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 ULK4Q96C45 1275 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.66■□□□□ 0.1
DDX54-204ENST00000546898 OSGEPL1Q9H4B0 414 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 ASB8Q9H765 288 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A7Q9HAW7 530 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A10Q9HAW8 530 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 UGT1A8Q9HAW9 530 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 THSD1Q9NS62 852 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 HOMER3Q9NSC5 361 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 KCNK4Q9NYG8 393 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 PAK5Q9P286 719 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 SLC23A2Q9UGH3 650 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 ATXN7L1Q9ULK2 861 aaPredicted RBP15.66■□□□□ 0.1
DDX54-204ENST00000546898 DRG1Q9Y295 367 aaKnown RBP15.66■□□□□ 0.1
DDX54-204ENST00000546898 JRKLQ9Y4A0 524 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 KCTD3Q9Y597 815 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 DNMT3AQ9Y6K1 912 aaPredicted RBP15.66■□□□□ 0.1
DDX54-204ENST00000546898 CACNA1GO43497 2377 aa15.66■□□□□ 0.1
DDX54-204ENST00000546898 DSPP15924 2871 aaKnown RBP15.65■□□□□ 0.1
DDX54-204ENST00000546898 IGHV1OR21-1A0A087WYE8 117 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 A0A1W2PNU3 283 aaPredicted RBP15.65■□□□□ 0.1
DDX54-204ENST00000546898 H7C0S8 307 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 GPR39O43194 453 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 ZSCAN12O43309 604 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 SUN1O94901 812 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 MSH3P20585 1137 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 ITGALP20701 1170 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 IDSP22304 550 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 RBMS1P29558 406 aaKnown RBP15.65■□□□□ 0.1
DDX54-204ENST00000546898 AKT1P31749 480 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 PCBP4P57723 403 aaKnown RBP15.65■□□□□ 0.1
DDX54-204ENST00000546898 DMPKQ09013 629 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 CDH17Q12864 832 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 NFATC2Q13469 925 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 SQSTM1Q13501 440 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 SEMA5AQ13591 1074 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 SNX1Q13596 522 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 LONRF2Q1L5Z9 754 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 AMZ1Q400G9 498 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 AGAP9Q5VTM2 703 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 C4orf22Q6V702 233 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 SNX20Q7Z614 316 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 PRR11Q96HE9 360 aaPredicted RBP15.65■□□□□ 0.1
DDX54-204ENST00000546898 SLC38A3Q99624 504 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 FOXP3Q9BZS1 431 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 ASCL3Q9NQ33 180 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 CRLS1Q9UJA2 301 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 LAMA5O15230 3695 aa15.65■□□□□ 0.1
DDX54-204ENST00000546898 KLHL33A6NCF5 533 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 PDZK1P1A8MUH7 402 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 E7EVH7 732 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 PLD2O14939 933 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 RRP8O43159 456 aaKnown RBP15.64■□□□□ 0.09
DDX54-204ENST00000546898 DUX1O43812 170 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 CEP104O60308 925 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 GAS8O95995 478 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 ITGA2BP08514 1039 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 XRCC1P18887 633 aaPredicted RBP15.64■□□□□ 0.09
DDX54-204ENST00000546898 CD1CP29017 333 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 CA5AP35218 305 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 EIF2S3P41091 472 aaKnown RBP15.64■□□□□ 0.09
DDX54-204ENST00000546898 LMAN1P49257 510 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 EPHA4P54764 986 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 UBE2IP63279 158 aaKnown RBP15.64■□□□□ 0.09
DDX54-204ENST00000546898 TRA2AQ13595 282 aaKnown RBP eCLIP15.64■□□□□ 0.09
DDX54-204ENST00000546898 POU6F1Q14863 301 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 GPR33Q49SQ1 333 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 ABRAXAS1Q6UWZ7 409 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 WASH2PQ6VEQ5 465 aa15.64■□□□□ 0.09
DDX54-204ENST00000546898 RAB11FIP2Q7L804 512 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms