RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ZNF567Q8N184 647 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 TXLNBQ8N3L3 684 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 ZNF843Q8N446 348 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 SLC25A41Q8N5S1 370 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 IPMKQ8NFU5 416 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 BLOC1S5Q8TDH9 187 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 LRRC45Q96CN5 670 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 HAUS1Q96CS2 278 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 PPP1R2P1Q96PQ5 205 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 HEMGNQ9BXL5 484 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 GOLPH3Q9H4A6 298 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 BPIFA1Q9NP55 256 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 ARFGAP3Q9NP61 516 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 IL26Q9NPH9 171 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 WASH6PQ9NQA3 447 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 POT1Q9NUX5 634 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 IL17CQ9P0M4 197 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 DNAJC16Q9Y2G8 782 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 PKP3Q9Y446 797 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 PCDHA3Q9Y5H8 950 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 PCYT1BQ9Y5K3 369 aaPredicted RBP9.23□□□□□ -0.93
YBX3-218ENST00000546298 MYLKQ15746 1914 aa9.23□□□□□ -0.93
YBX3-218ENST00000546298 AHCTF1Q8WYP5 2266 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 FASNP49327 2511 aaKnown RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 GLYATL1P3A0A0U1RQE8 302 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 MACROD2A1Z1Q3 448 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 C2orf81A6NN90 581 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 A8MU76 341 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 AURKAO14965 403 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 STX7O15400 261 aaKnown RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 TOX3O15405 576 aaPredicted RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 CAPN5O15484 640 aaPredicted RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 MTX2O75431 263 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 C1QL1O75973 258 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 TJP3O95049 919 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 CTNNA1P35221 906 aaKnown RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 PTPN7P35236 360 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 HALP42357 657 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 MARCKSL1P49006 195 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 RWDD2BP57060 319 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 UBE2IP63279 158 aaKnown RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 MC2RQ01718 297 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 ADCY2Q08462 1091 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 TMEM115Q12893 351 aaPredicted RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 NOMO1Q15155 1222 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 SLC1A5Q15758 541 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 PLA2G4EQ3MJ16 856 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 ATP13A5Q4VNC0 1218 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 SIRPB2Q5JXA9 342 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 FAM182AQ5T1J6 154 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 AGAP9Q5VTM2 703 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 ABRAXAS1Q6UWZ7 409 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 CEACAM20Q6UY09 585 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 GLT6D1Q7Z4J2 308 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 TRAPPC5Q8IUR0 188 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 TTC30BQ8N4P2 665 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 IL22RA1Q8N6P7 574 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 ACTL9Q8TC94 416 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 KRT35Q92764 455 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 NKD1Q969G9 470 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 KIAA1143Q96AT1 154 aaPredicted RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 CXorf40BQ96DE9 158 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 OXNAD1Q96HP4 312 aaPredicted RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 ZNF514Q96K75 400 aaPredicted RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 MRGPRX2Q96LB1 330 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 EFHD1Q9BUP0 239 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 TRIT1Q9H3H1 467 aaKnown RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 FBXO8Q9NRD0 319 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 OCIAD1Q9NX40 245 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 TMEM9Q9P0T7 183 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 AAR2Q9Y312 384 aaKnown RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 PCDHGA4Q9Y5G9 962 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 B3GALT1Q9Y5Z6 326 aa9.22□□□□□ -0.93
YBX3-218ENST00000546298 DNMT3AQ9Y6K1 912 aaPredicted RBP9.22□□□□□ -0.93
YBX3-218ENST00000546298 KLHL33A6NCF5 533 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 GOLGA6L9A6NEM1 432 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 C5orf60A6NFR6 353 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 SOWAHDA6NJG2 315 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 BTNL10A8MVZ5 291 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 RAD1O60671 282 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 POP7O75817 140 aaKnown RBP9.21□□□□□ -0.94
YBX3-218ENST00000546298 UBXN7O94888 489 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 PTMAP06454 111 aaKnown RBP9.21□□□□□ -0.94
YBX3-218ENST00000546298 ANKRD34CP0C6C1 535 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 RBP3P10745 1247 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 LPOP22079 712 aaPredicted RBP9.21□□□□□ -0.94
YBX3-218ENST00000546298 FECHP22830 423 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 MAP4P27816 1152 aaKnown RBP9.21□□□□□ -0.94
YBX3-218ENST00000546298 RBL1P28749 1068 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 UGT1A3P35503 534 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 SLC19A1P41440 591 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 CHRNA4P43681 627 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 EIF3EP60228 445 aaKnown RBP9.21□□□□□ -0.94
YBX3-218ENST00000546298 LY6DQ14210 128 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 CHRNA6Q15825 494 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 LONRF2Q1L5Z9 754 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 ANKS6Q68DC2 871 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 KLHL35Q6PF15 583 aa9.21□□□□□ -0.94
YBX3-218ENST00000546298 DARS2Q6PI48 645 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms