RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 LRR1Q96L50 414 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 PAIP1Q9H074 479 aaKnown RBP4.37□□□□□ -1.71
SNHG1-224ENST00000545688 WASH6PQ9NQA3 447 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 CNOT8Q9UFF9 292 aaKnown RBP4.37□□□□□ -1.71
SNHG1-224ENST00000545688 LRRFIP2Q9Y608 721 aaKnown RBP4.37□□□□□ -1.71
SNHG1-224ENST00000545688 WDR7Q9Y4E6 1490 aa4.37□□□□□ -1.71
SNHG1-224ENST00000545688 ZNF500O60304 480 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-224ENST00000545688 KCNK5O95279 499 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 PRSS56P0CW18 603 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 XBP1P17861 261 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 HSPA2P54652 639 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 F2RL1P55085 397 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 CDC16Q13042 620 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 FAM53AQ6NSI3 398 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-224ENST00000545688 INO80CQ6PI98 192 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-224ENST00000545688 RBMS3Q6XE24 437 aaKnown RBP4.36□□□□□ -1.71
SNHG1-224ENST00000545688 ESX1Q8N693 406 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 UTP15Q8TED0 518 aaKnown RBP4.36□□□□□ -1.71
SNHG1-224ENST00000545688 MMABQ96EY8 250 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-224ENST00000545688 ABHD8Q96I13 439 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 SMC6Q96SB8 1091 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 PIP5K1AQ99755 562 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 AGXT2Q9BYV1 514 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 RANBP17Q9H2T7 1088 aaKnown RBP4.36□□□□□ -1.71
SNHG1-224ENST00000545688 SCPEP1Q9HB40 452 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 TRPC7Q9HCX4 862 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 COPG2Q9UBF2 871 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 STK39Q9UEW8 545 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 JRKLQ9Y4A0 524 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 CLIC4Q9Y696 253 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 MAU2Q9Y6X3 613 aa4.36□□□□□ -1.71
SNHG1-224ENST00000545688 KIF21BO75037 1637 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 A0A1W2PPI3 338 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 HHLA1C9JL84 531 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 TGFB1I1O43294 461 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 EXTL3O43909 919 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 PAGE4O60829 102 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 PDE9AO76083 593 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 CAVIN2O95810 425 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 CD48P09326 243 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 MCCP23508 829 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 NR2F2P24468 414 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 HOXC8P31273 242 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 ICAM3P32942 547 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 RARSP54136 660 aaKnown RBP4.35□□□□□ -1.71
SNHG1-224ENST00000545688 MLLT10P55197 1068 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 MBTD1Q05BQ5 628 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 FRG1Q14331 258 aaKnown RBP4.35□□□□□ -1.71
SNHG1-224ENST00000545688 DHX8Q14562 1220 aaKnown RBP4.35□□□□□ -1.71
SNHG1-224ENST00000545688 KIR2DS3Q14952 304 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 ZC2HC1CQ53FD0 456 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-224ENST00000545688 PLXDC2Q6UX71 529 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 Q75L30 129 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 ARMC8Q8IUR7 673 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 CPXCR1Q8N123 301 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 DBF4BQ8NFT6 615 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 OR1J2Q8NGS2 313 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 TMEM190Q8WZ59 177 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 OXNAD1Q96HP4 312 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-224ENST00000545688 STRA6Q9BX79 667 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 PIGMQ9H3S5 423 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 BICC1Q9H694 974 aaKnown RBP4.35□□□□□ -1.71
SNHG1-224ENST00000545688 DLGAP2Q9P1A6 1054 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 SLC13A4Q9UKG4 626 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 C2CD2Q9Y426 696 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 CUL7Q14999 1698 aa4.35□□□□□ -1.71
SNHG1-224ENST00000545688 A0A1W2PRG0 241 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 EIF4E1BA6NMX2 242 aaKnown RBP4.34□□□□□ -1.71
SNHG1-224ENST00000545688 JRKO75564 520 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 WISP2O76076 250 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 GNB3P16520 340 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 TMEM115Q12893 351 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-224ENST00000545688 PDE1CQ14123 709 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-224ENST00000545688 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 NSUN5P2Q63ZY6 315 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 LONP2Q86WA8 852 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 MYRIPQ8NFW9 859 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 INTS12Q96CB8 462 aaKnown RBP4.34□□□□□ -1.71
SNHG1-224ENST00000545688 SENP5Q96HI0 755 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-224ENST00000545688 ACAD8Q9UKU7 415 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 CARMIL1Q5VZK9 1371 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 PRAG1Q86YV5 1406 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 UGGT2Q9NYU1 1516 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 SPATA31D1Q6ZQQ2 1576 aa4.34□□□□□ -1.71
SNHG1-224ENST00000545688 BCORL1Q5H9F3 1711 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 ZCCHC11Q5TAX3 1644 aaKnown RBP4.33□□□□□ -1.72
SNHG1-224ENST00000545688 YEATS2Q9ULM3 1422 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 IGKV3D-20A0A0C4DH25 116 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 A0A0G2JLW4 131 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 A0A0G2JNG1 304 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 NPIPB15A6NHN6 443 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-224ENST00000545688 NR5A2O00482 541 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 ATP2A1O14983 1001 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 SEC14L2O76054 403 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 TSHBP01222 138 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 NR3C1P04150 777 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 UBL4AP11441 157 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 MSH3P20585 1137 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 ELF1P32519 619 aa4.33□□□□□ -1.72
SNHG1-224ENST00000545688 OLR1P78380 273 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms