RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PDXKO00764 312 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 LRRTM2O43300 516 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PSPNO60542 156 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 SNAP91O60641 907 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 KLHL41O60662 606 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 DNAJB5O75953 348 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 ENDOD1O94919 500 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 NADKO95544 446 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 POP4O95707 220 aaKnown RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 GSRP00390 522 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 IGLV3-25P01717 112 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 FUCA1P04066 466 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 NR3C1P04150 777 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PCCBP05166 539 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 FGF1P05230 155 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 FYNP06241 537 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 HOXC4P09017 264 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PAEPP09466 180 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PYGMP11217 842 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CCNB1P14635 433 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 BPIP17213 487 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PRKCAP17252 672 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CDK11BP21127 795 aaKnown RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 XPAP23025 273 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 F8A1P23610 371 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 TBXAS1P24557 533 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 GARSP41250 739 aaKnown RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 RGS7P49802 495 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 DNA2P51530 1060 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 NDST2P52849 883 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 MAZP56270 477 aaKnown RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 SNRPD1P62314 119 aaKnown RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 YWHAZP63104 245 aaKnown RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CDK17Q00537 523 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CUL2Q13617 745 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 KIR3DS1Q14943 382 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 POLD3Q15054 466 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PLCL1Q15111 1095 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CNGA2Q16280 664 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 UGT8Q16880 541 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 SMTNL2Q2TAL5 461 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 WSCD2Q2TBF2 565 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 C5orf22Q49AR2 442 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM52BQ4KMG9 183 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM177Q53S58 311 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 MROH9Q5TGP6 573 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 OGFOD2Q6N063 350 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PMF1Q6P1K2 205 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 LRRC31Q6UY01 552 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 LINGO4Q6UY18 593 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 ARHGAP22Q7Z5H3 698 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 SYVN1Q86TM6 617 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 LILRA2Q8N149 483 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 RYBPQ8N488 228 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 LZTR1Q8N653 840 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PDILTQ8N807 584 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 IQUBQ8NA54 791 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 Q8NA96 180 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 FBXL13Q8NEE6 735 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 OR52K2Q8NGK3 314 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 UBA3Q8TBC4 463 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CLEC4CQ8WTT0 213 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 TM9SF4Q92544 642 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PDXPQ96GD0 296 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PSMB7Q99436 277 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 SLC38A3Q99624 504 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 C7orf25Q9BPX7 421 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 GPR87Q9BY21 358 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PANK2Q9BZ23 570 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 MIS12Q9H081 205 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM168Q9H0V1 697 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 ING2Q9H160 280 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 EPB41L1Q9H4G0 881 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 STN1Q9H668 368 aaKnown RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 FAM204AQ9H8W3 233 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 SLC39A2Q9NP94 309 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 TRNAU1APQ9NX07 287 aaKnown RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 RAB20Q9NX57 234 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 C5AR2Q9P296 337 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 COPG2Q9UBF2 871 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 FBLN5Q9UBX5 448 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 B4GALT6Q9UBX8 382 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 MCM8Q9UJA3 840 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 PADI1Q9ULC6 663 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 VANGL2Q9ULK5 521 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CBLCQ9ULV8 474 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 CTNND2Q9UQB3 1225 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 OR1A2Q9Y585 309 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 HS3ST4Q9Y661 456 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 MORC2Q9Y6X9 1032 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-220ENST00000544550 MYH10P35580 1976 aa4.07□□□□□ -1.76
SNHG1-220ENST00000544550 ILVBLA1L0T0 632 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 PRSS38A1L453 326 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CFAP69A5D8W1 941 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 GOLGA6L3A6NEY3 463 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ZSCAN5CA6NGD5 496 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 RASA4BC9J798 803 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF561-AS1K7EIQ3 104 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 KRIT1O00522 736 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 RASA4O43374 803 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms