RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CHST15Q7LFX5 561 aaPredicted RBP18.86■□□□□ 0.61
DDX55-211ENST00000544429 HOOK3Q86VS8 718 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 NAGSQ8N159 534 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 AGGF1Q8N302 714 aaeCLIP18.86■□□□□ 0.61
DDX55-211ENST00000544429 PNPLA1Q8N8W4 532 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 PPHLN1Q8NEY8 458 aaKnown RBP18.86■□□□□ 0.61
DDX55-211ENST00000544429 GLMNQ92990 594 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 HDAC10Q969S8 669 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 TRIM44Q96DX7 344 aaPredicted RBP18.86■□□□□ 0.61
DDX55-211ENST00000544429 CCDC97Q96F63 343 aaPredicted RBP18.86■□□□□ 0.61
DDX55-211ENST00000544429 ZCCHC2Q9C0B9 1178 aaKnown RBP18.86■□□□□ 0.61
DDX55-211ENST00000544429 CDC23Q9UJX2 597 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 SOX13Q9UN79 622 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 SLC30A1Q9Y6M5 507 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 KNTC1P50748 2209 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 CCDC78A2IDD5 438 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 FAM221BA6H8Z2 402 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 TTI1O43156 1089 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 EML2O95834 649 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 PRSS56P0CW18 603 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 ACP5P13686 325 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 KCNA4P22459 653 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 ACRV1P26436 265 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 ARNTP27540 789 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 ACTR1BP42025 376 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 RPIAP49247 311 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 ACTR1AP61163 376 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 SHC2P98077 582 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 DAB2P98082 770 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 DMPKQ09013 629 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 SMAD1Q15797 465 aaKnown RBP18.85■□□□□ 0.61
DDX55-211ENST00000544429 C14orf28Q4W4Y0 310 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 GDAP1Q8TB36 358 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 ZNF514Q96K75 400 aaPredicted RBP18.85■□□□□ 0.61
DDX55-211ENST00000544429 KRT12Q99456 494 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 DPEP2Q9H4A9 486 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 FAM96AQ9H5X1 160 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 EVA1BQ9NVM1 165 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 ZDHHC3Q9NYG2 299 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 GULP1Q9UBP9 304 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 ASIC3Q9UHC3 531 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 CRLS1Q9UJA2 301 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 PADI4Q9UM07 663 aa18.85■□□□□ 0.61
DDX55-211ENST00000544429 DNMT3AQ9Y6K1 912 aaPredicted RBP18.85■□□□□ 0.61
DDX55-211ENST00000544429 OR51F1A6NGY5 319 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 ZNF7P17097 686 aaPredicted RBP18.84■□□□□ 0.61
DDX55-211ENST00000544429 NMBRP28336 390 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 TERF1P54274 439 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 BCL7AQ4VC05 210 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 AFTPHQ6ULP2 937 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 CRTC3Q6UUV7 619 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 XKR5Q6UX68 686 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 ZNF438Q7Z4V0 828 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 PCGF5Q86SE9 256 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 SERPINA9Q86WD7 417 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 MPP5Q8N3R9 675 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 ZDHHC1Q8WTX9 485 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 HEXDCQ8WVB3 486 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 NAT6Q93015 286 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 LINC00615Q96LM1 132 aaPredicted RBP18.84■□□□□ 0.61
DDX55-211ENST00000544429 COPS8Q99627 209 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 TRIM51Q9BSJ1 452 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 SIRPGQ9P1W8 387 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 TBC1D29Q9UFV1 150 aa18.84■□□□□ 0.61
DDX55-211ENST00000544429 B4DGG1 531 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 KIF2AO00139 706 aaPredicted RBP18.83■□□□□ 0.6
DDX55-211ENST00000544429 NUDT21O43809 227 aaKnown RBP18.83■□□□□ 0.6
DDX55-211ENST00000544429 KCNJ13O60928 360 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 GOT2P00505 430 aaKnown RBP18.83■□□□□ 0.6
DDX55-211ENST00000544429 PNLIPP16233 465 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 GLB1P16278 677 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 FOXK2Q01167 660 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 CBLBQ13191 982 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 NR1D2Q14995 579 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 DBN1Q16643 649 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 ZNF658BQ4V348 819 aaPredicted RBP18.83■□□□□ 0.6
DDX55-211ENST00000544429 ZRANB3Q5FWF4 1079 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 PERM1Q5SV97 790 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 PACS1Q6VY07 963 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 TRAPPC5Q8IUR0 188 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 SFRP1Q8N474 314 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 OR6C4Q8NGE1 309 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 IFI44Q8TCB0 444 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 PATE1Q8WXA2 126 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 MFSD3Q96ES6 412 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 SGF29Q96ES7 293 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 SIGLEC10Q96LC7 697 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 TTC25Q96NG3 672 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 KCNK6Q9Y257 313 aa18.83■□□□□ 0.6
DDX55-211ENST00000544429 SDR42E2A6NKP2 422 aa18.82■□□□□ 0.6
DDX55-211ENST00000544429 OR2AG2A6NM03 316 aa18.82■□□□□ 0.6
DDX55-211ENST00000544429 GOLGA8MH3BSY2 632 aa18.82■□□□□ 0.6
DDX55-211ENST00000544429 SEC31AO94979 1220 aaKnown RBP18.82■□□□□ 0.6
DDX55-211ENST00000544429 TOP3BO95985 862 aaKnown RBP18.82■□□□□ 0.6
DDX55-211ENST00000544429 ATP1B2P14415 290 aaPredicted RBP18.82■□□□□ 0.6
DDX55-211ENST00000544429 MSH3P20585 1137 aa18.82■□□□□ 0.6
DDX55-211ENST00000544429 AKT1P31749 480 aa18.82■□□□□ 0.6
DDX55-211ENST00000544429 FASLGP48023 281 aa18.82■□□□□ 0.6
DDX55-211ENST00000544429 ARCN1P48444 511 aaKnown RBP18.82■□□□□ 0.6
DDX55-211ENST00000544429 PRLHRP49683 370 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms